RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 HRASLSQ9HDD0 168 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 TAS2R8Q9NYW2 309 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 KLK9Q9UKQ9 250 aa10.55□□□□□ -0.72
VARS-228ENST00000495010 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 A0A1B0GW64 132 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 TGOLN2O43493 480 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 RPA2P15927 270 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
VARS-228ENST00000495010 FABP5Q01469 135 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 RBMS2Q15434 407 aaKnown RBP10.54□□□□□ -0.72
VARS-228ENST00000495010 ZNF66Q6ZN08 573 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 MFSD4AQ8N468 514 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 C11orf45Q8TAV5 145 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 ZNF436Q9C0F3 470 aaPredicted RBP10.54□□□□□ -0.72
VARS-228ENST00000495010 VCXQ9H320 206 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
VARS-228ENST00000495010 TPRKBQ9Y3C4 175 aa10.54□□□□□ -0.72
VARS-228ENST00000495010 IGKV1D-13A0A0B4J2D9 117 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 IGLV2-14P01704 120 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 IGKV1-13P0DP09 117 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 FCGR2BP31994 310 aaPredicted RBP10.53□□□□□ -0.72
VARS-228ENST00000495010 MLLT11Q13015 90 aaPredicted RBP10.53□□□□□ -0.72
VARS-228ENST00000495010 IRF3Q14653 427 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 CDNFQ49AH0 187 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 CNIH2Q6PI25 160 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 RARRES2Q99969 163 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 C20orf24Q9BUV8 137 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
VARS-228ENST00000495010 OR2T8A6NH00 312 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 IFITM5A6NNB3 132 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 MPTX1A8MV57 137 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 MYL9P24844 172 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
VARS-228ENST00000495010 RCN1Q15293 331 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 TIMM50Q3ZCQ8 353 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 VN1R17PQ8TDU5 208 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 C2CD4CQ8TF44 421 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 CCDC90BQ9GZT6 254 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 CSTL1Q9H114 145 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 DCSTAMPQ9H295 470 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 BET1LQ9NYM9 111 aa10.52□□□□□ -0.73
VARS-228ENST00000495010 ELF5Q9UKW6 265 aaPredicted RBP10.52□□□□□ -0.73
VARS-228ENST00000495010 NDUFA4O00483 81 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 TNFSF12O43508 249 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 RGS10O43665 173 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 CMC4P56277 68 aaPredicted RBP10.51□□□□□ -0.73
VARS-228ENST00000495010 TCTAP57738 103 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 OR10A3P58181 314 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 OR2B8PP59922 312 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 HACD4Q5VWC8 232 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 BSCL2Q96G97 398 aaPredicted RBP10.51□□□□□ -0.73
VARS-228ENST00000495010 MGLLQ99685 303 aa10.51□□□□□ -0.73
VARS-228ENST00000495010 SRSF8Q9BRL6 282 aaKnown RBP10.51□□□□□ -0.73
VARS-228ENST00000495010 HERC2O95714 4834 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 TRAV1-2A0A0B4J238 106 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 S1PR2O95136 353 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 CTSDP07339 412 aaPredicted RBP10.5□□□□□ -0.73
VARS-228ENST00000495010 RAB3BP20337 219 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 BRWD1-AS2P59051 145 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 GNG2P59768 71 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 EIF4EBP1Q13541 118 aaPredicted RBP10.5□□□□□ -0.73
VARS-228ENST00000495010 OGFRL1Q5TC84 451 aaPredicted RBP10.5□□□□□ -0.73
VARS-228ENST00000495010 SLC25A24Q6NUK1 477 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 OR11H2Q8NH07 326 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 SECTM1Q8WVN6 248 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 GPHA2Q96T91 129 aa10.5□□□□□ -0.73
VARS-228ENST00000495010 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 UPK2O00526 184 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 EBAG9O00559 213 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 ZNF207O43670 478 aaKnown RBP10.49□□□□□ -0.73
VARS-228ENST00000495010 TAS2R31P59538 309 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 ARPC4P59998 168 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 PRR20EP86478 221 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 PRR20CP86479 221 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 PRR20DP86480 221 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 PRR20BP86481 221 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 PRR20AP86496 221 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 CATR1Q13166 79 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 UBAC2Q8NBM4 344 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 DMBX1Q8NFW5 382 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 NUDCD2Q8WVJ2 157 aa10.49□□□□□ -0.73
VARS-228ENST00000495010 QTRT1Q9BXR0 403 aaKnown RBP10.49□□□□□ -0.73
VARS-228ENST00000495010 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
VARS-228ENST00000495010 CCL28Q9NRJ3 127 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms