RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TCTEX1D2Q8WW35 142 aa13.39□□□□□ -0.27
SNX17-209ENST00000494893 R3HDM4Q96D70 268 aa13.39□□□□□ -0.27
SNX17-209ENST00000494893 PHB2Q99623 299 aa13.39□□□□□ -0.27
SNX17-209ENST00000494893 FAM103A1Q9BTL3 118 aaKnown RBP13.39□□□□□ -0.27
SNX17-209ENST00000494893 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
SNX17-209ENST00000494893 MED28Q9H204 178 aa13.39□□□□□ -0.27
SNX17-209ENST00000494893 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 HMX3A6NHT5 357 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 IGLV1-40P01703 118 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 VDAC1P21796 283 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 UCP1P25874 307 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 PSMB8P28062 276 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 UBE2KP61086 200 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 FOXE3Q13461 319 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 PPP1R27Q86WC6 154 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 OSR1Q8TAX0 266 aaPredicted RBP13.38□□□□□ -0.27
SNX17-209ENST00000494893 MYOZ3Q8TDC0 251 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 KLK15Q9H2R5 256 aa13.38□□□□□ -0.27
SNX17-209ENST00000494893 FAM212BQ9NTI7 297 aaPredicted RBP13.38□□□□□ -0.27
SNX17-209ENST00000494893 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 RAMP3O60896 148 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 TRAPPC2P0DI81 140 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 TRAPPC2BP0DI82 140 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 SAA1P0DJI8 122 aaPredicted RBP13.37□□□□□ -0.27
SNX17-209ENST00000494893 SRPXP78539 464 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 KIAA0141Q14154 515 aaPredicted RBP13.37□□□□□ -0.27
SNX17-209ENST00000494893 FCN2Q15485 313 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 ETV3LQ6ZN32 361 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 LGI3Q8N145 548 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 LRTM2Q8N967 370 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 TMEM56Q96MV1 263 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 GON7Q9BXV9 100 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 PRELID3BQ9Y3B1 194 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 TMEM56-RWDD3S4R434 201 aa13.37□□□□□ -0.27
SNX17-209ENST00000494893 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 CDS2O95674 445 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 ELANEP08246 267 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 SULT1A3P0DMM9 295 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 SULT1A4P0DMN0 295 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 VKORC1L1Q8N0U8 176 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 SPAG16Q8N0X2 631 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 CD300LFQ8TDQ1 290 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 OR4F4Q96R69 305 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 ZFP57Q9NU63 452 aa13.36□□□□□ -0.27
SNX17-209ENST00000494893 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.277e-7■■■□□ 17
SNX17-209ENST00000494893 SERPINE2P07093 398 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 HLA-GP17693 338 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 LPAR6P43657 344 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 FXYD3Q14802 87 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 PRSS8Q16651 343 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 VMA21Q3ZAQ7 101 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 ASPHD1Q5U4P2 390 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 SELENOHQ8IZQ5 122 aaKnown RBP13.35□□□□□ -0.27
SNX17-209ENST00000494893 LFNGQ8NES3 379 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 LHFPL5Q8TAF8 219 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 ARPC1AQ92747 370 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 IL22RA2Q969J5 263 aa13.35□□□□□ -0.27
SNX17-209ENST00000494893 PIGBOS1A0A0B4J2F0 54 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 RPA2P15927 270 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 GNB1P62873 340 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 CXorf66Q5JRM2 361 aaPredicted RBP13.34□□□□□ -0.27
SNX17-209ENST00000494893 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 PUSL1Q8N0Z8 303 aaKnown RBP13.34□□□□□ -0.27
SNX17-209ENST00000494893 GRPEL2Q8TAA5 225 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 ABHD5Q8WTS1 349 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 ZNF430Q9H8G1 570 aaPredicted RBP13.34□□□□□ -0.27
SNX17-209ENST00000494893 MGAT4CQ9UBM8 478 aa13.34□□□□□ -0.27
SNX17-209ENST00000494893 A0A1W2PN81 502 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 CXCL3P19876 107 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 CHRNA7P36544 502 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 CDX1P47902 265 aaPredicted RBP13.33□□□□□ -0.28
SNX17-209ENST00000494893 AKIRIN2Q53H80 203 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 TMEM268Q5VZI3 342 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 UNQ5815/PRO19632Q6UWF5 114 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 KLHL30-AS1Q8NEE0 82 aa13.33□□□□□ -0.28
SNX17-209ENST00000494893 RBPMSQ93062 196 aaKnown RBP13.33□□□□□ -0.28
SNX17-209ENST00000494893 FOXA2Q9Y261 457 aaPredicted RBP13.33□□□□□ -0.28
SNX17-209ENST00000494893 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 GOSR2O14653 212 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 ADAP1O75689 374 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 HPRT1P00492 218 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 HOXB5P09067 269 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 PF4V1P10720 104 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 C10orf55Q5SWW7 151 aa13.32□□□□□ -0.28
SNX17-209ENST00000494893 LYZL2Q7Z4W2 148 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms