RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 C7orf69Q9H7B7 122 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ERG28Q9UKR5 140 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF257Q9Y2Q1 563 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ATG2BQ96BY7 2078 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 KIAA1549Q9HCM3 1950 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 KIR2DS5A0A0G2JLQ3 304 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 A0A0G2JNG1 304 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 SHISA9B4DS77 424 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 KIR2DS3K7RE56 304 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 SPRY1O43609 319 aaPredicted RBP3.98□□□□□ -1.77
PRKD3-210ENST00000494667 FAM87AP0C7U9 286 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
PRKD3-210ENST00000494667 KIR2DS5Q14953 304 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 TIMM23BQ5SRD1 257 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 BPIFA4PQ86YQ2 179 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 ATOH7Q8N100 152 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 TSTD1Q8NFU3 115 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 OR9G1Q8NH87 305 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 LMX1AQ8TE12 382 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 VWCEQ96DN2 955 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 RAX2Q96IS3 184 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 FBRSQ9HAH7 460 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 TMEM167BQ9NRX6 74 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 HSPB8Q9UJY1 196 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 DOCK8Q8NF50 2099 aa3.98□□□□□ -1.77
PRKD3-210ENST00000494667 GTF3C1Q12789 2109 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ANGPTL7O43827 346 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CLDN14O95500 239 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CYC1P08574 325 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 USF1P22415 310 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 SRSF1Q07955 248 aaKnown RBP eCLIP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PLCXD2Q0VAA5 305 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PDCD1Q15116 288 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 GDF5OSQ5U4N7 250 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 SYT13Q7L8C5 426 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 KIR3DL3Q8N743 410 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 TPRX1Q8N7U7 411 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CT55Q8WUE5 264 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PHLDA1Q8WV24 401 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ABHD17AQ96GS6 310 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 GGTLC1Q9BX51 225 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 GFRA4Q9GZZ7 299 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF442Q9H7R0 627 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 TRAPPC2LQ9UL33 140 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PCNTO95613 3336 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF816-ZNF321PA0A0X1KG74 233 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 TEX48A0A1B0GUV7 120 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 A0A1W2PRE2 83 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 TLX3O43711 291 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 SS18L1O75177 396 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CELA2BP08218 269 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CENPWQ5EE01 88 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CDCP2Q5VXM1 449 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 INO80CQ6PI98 192 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 BRICD5Q6PL45 260 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ZDHHC23Q8IYP9 409 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 FGFRL1Q8N441 504 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 OR51H1Q8NH63 302 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 COL25A1Q9BXS0 654 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRDM6Q9NQX0 595 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 LINC00312Q9Y6C7 94 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PCSK5Q92824 1860 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 EFNA2O43921 213 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 EGR1P18146 543 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 KIR3DS1Q14943 382 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 NRN1LQ496H8 165 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 GTSF1Q8WW33 167 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 VGLL1Q99990 258 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 MS4A5Q9H3V2 200 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 GEMIN7Q9H840 131 aaKnown RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 OBP2AQ9NY56 170 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 IDI2-AS1Q9NZ38 188 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 C19orf25Q9UFG5 118 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 SPCS1Q9Y6A9 102 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 NCKAP5O14513 1909 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PTPRSQ13332 1948 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 TRGV8A0A0C4DH27 118 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 A0A1W2PPV4 95 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 FABP2P12104 132 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 CDAP32320 146 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRR20EP86478 221 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRR20CP86479 221 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRR20DP86480 221 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRR20BP86481 221 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRR20AP86496 221 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 KLRD1Q13241 179 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 DMRTC1Q5HYR2 192 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 OR2AE1Q8NHA4 323 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 C1orf159Q96HA4 380 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 RITA1Q96K30 269 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 MAP1LC3CQ9BXW4 147 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 PRDM14Q9GZV8 571 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 VCX2Q9H322 139 aa3.97□□□□□ -1.77
PRKD3-210ENST00000494667 FNDC4Q9H6D8 234 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-210ENST00000494667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 HELTA6NFD8 242 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms