RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RNASE12Q5GAN4 147 aaKnown RBP25.38■■□□□ 1.65
CBX4-203ENST00000494546 FBXL7Q9UJT9 491 aa25.38■■□□□ 1.65
CBX4-203ENST00000494546 IGLV1-51P01701 117 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 REG1AP05451 166 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 F2RP25116 425 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 ALDH3B2P48448 385 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 ERVK-16P61578 105 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 SORL1Q92673 2214 aa25.37■■□□□ 1.65
CBX4-203ENST00000494546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP25.36■■□□□ 1.65
CBX4-203ENST00000494546 CGB1A6NKQ9 187 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 BMPR1BO00238 502 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 DHFRP00374 187 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 CRYGCP07315 174 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 PHLDA2Q53GA4 152 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 DGCR14Q96DF8 476 aaKnown RBP25.36■■□□□ 1.65
CBX4-203ENST00000494546 ASCL2Q99929 193 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 COMMD5Q9GZQ3 224 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 EXTL2Q9UBQ6 330 aa25.36■■□□□ 1.65
CBX4-203ENST00000494546 LPAR6P43657 344 aa25.35■■□□□ 1.65
CBX4-203ENST00000494546 OR2B8PP59922 312 aa25.35■■□□□ 1.65
CBX4-203ENST00000494546 IL34Q6ZMJ4 242 aa25.35■■□□□ 1.65
CBX4-203ENST00000494546 DNAH9Q9NYC9 4486 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 NHLRC4P0CG21 123 aaPredicted RBP25.34■■□□□ 1.65
CBX4-203ENST00000494546 DEFA4P12838 97 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 CTRB1P17538 263 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 CTRB2Q6GPI1 263 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 FCAMRQ8WWV6 532 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 FANCD2OSQ96PS1 177 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 COL7A1Q02388 2944 aa25.34■■□□□ 1.65
CBX4-203ENST00000494546 MARCH11A6NNE9 402 aa25.33■■□□□ 1.65
CBX4-203ENST00000494546 NDUFB8O95169 186 aa25.33■■□□□ 1.65
CBX4-203ENST00000494546 LPCAT3Q6P1A2 487 aa25.33■■□□□ 1.65
CBX4-203ENST00000494546 S4R3C0 116 aa25.33■■□□□ 1.65
CBX4-203ENST00000494546 PPP5D1E7EU14 171 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 M0QYG6 137 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 KRASP01116 189 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 IGHV3-23P01764 117 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 CSN3P07498 182 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 S100GP29377 79 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 FAM209BQ5JX69 171 aa25.32■■□□□ 1.64
CBX4-203ENST00000494546 ZNF585BQ52M93 769 aa25.31■■□□□ 1.64
CBX4-203ENST00000494546 QTRT1Q9BXR0 403 aaKnown RBP25.31■■□□□ 1.64
CBX4-203ENST00000494546 PEMTQ9UBM1 199 aa25.31■■□□□ 1.64
CBX4-203ENST00000494546 KLK11Q9UBX7 282 aa25.31■■□□□ 1.64
CBX4-203ENST00000494546 HIST1H1BP16401 226 aaKnown RBP25.3■■□□□ 1.64
CBX4-203ENST00000494546 G6PCP35575 357 aa25.3■■□□□ 1.64
CBX4-203ENST00000494546 SPCS2Q15005 226 aa25.3■■□□□ 1.64
CBX4-203ENST00000494546 CLVS1Q8IUQ0 354 aaPredicted RBP25.3■■□□□ 1.64
CBX4-203ENST00000494546 OR52I2Q8NH67 350 aa25.3■■□□□ 1.64
CBX4-203ENST00000494546 IGLC7A0M8Q6 106 aa25.29■■□□□ 1.64
CBX4-203ENST00000494546 IGLV11-55A0A075B6I3 123 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 RGS5O15539 181 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 HLA-AP01891 365 aaKnown RBP25.28■■□□□ 1.64
CBX4-203ENST00000494546 IFNA6P05013 189 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 FGF2P09038 288 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 CLEC19AQ6UXS0 136 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 TBC1D26Q86UD7 250 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 SLC38A6Q8IZM9 456 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 OR10W1Q8NGF6 305 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 EEF1AKMT3Q96AZ1 226 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 CCDC140Q96MF4 163 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 ABHD1Q96SE0 405 aa25.28■■□□□ 1.64
CBX4-203ENST00000494546 SRSF8Q9BRL6 282 aaKnown RBP25.28■■□□□ 1.64
CBX4-203ENST00000494546 H0Y980 276 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 GGCTO75223 188 aaKnown RBP25.27■■□□□ 1.64
CBX4-203ENST00000494546 UCP3P55916 312 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 KLK9Q2XQG4 91 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 RNASE10Q5GAN6 216 aaKnown RBP25.27■■□□□ 1.64
CBX4-203ENST00000494546 MIXL1Q9H2W2 232 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 SIGLEC8Q9NYZ4 499 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 KLK9Q9UKQ9 250 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 NSG2Q9Y328 171 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 DMRT1Q9Y5R6 373 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 U3KQK5 164 aa25.27■■□□□ 1.64
CBX4-203ENST00000494546 TEX50A0A1B0GTY4 177 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 OR2C1O95371 312 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 TRAPPC2P0DI81 140 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 TRAPPC2BP0DI82 140 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 OR1L8Q8NGR8 309 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 C15orf40Q8WUR7 153 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 HINT2Q9BX68 163 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 MTFP1Q9UDX5 166 aa25.26■■□□□ 1.63
CBX4-203ENST00000494546 SNAPC5O75971 98 aa25.25■■□□□ 1.63
CBX4-203ENST00000494546 CD3DP04234 171 aa25.25■■□□□ 1.63
CBX4-203ENST00000494546 FRMD6-AS1P0C7T7 363 aa25.25■■□□□ 1.63
CBX4-203ENST00000494546 ARL3P36405 182 aa25.25■■□□□ 1.63
CBX4-203ENST00000494546 LAX1Q8IWV1 398 aa25.25■■□□□ 1.63
CBX4-203ENST00000494546 CTDSP2O14595 271 aa25.24■■□□□ 1.63
CBX4-203ENST00000494546 TPPPO94811 219 aa25.24■■□□□ 1.63
CBX4-203ENST00000494546 OR13C7P0DN81 318 aa25.24■■□□□ 1.63
CBX4-203ENST00000494546 THOC7Q6I9Y2 204 aaKnown RBP25.24■■□□□ 1.63
CBX4-203ENST00000494546 RAB2BQ8WUD1 216 aa25.24■■□□□ 1.63
CBX4-203ENST00000494546 OR51B2Q9Y5P1 312 aa25.24■■□□□ 1.63
CBX4-203ENST00000494546 MFSD2BA6NFX1 497 aa25.23■■□□□ 1.63
CBX4-203ENST00000494546 PGAM2P15259 253 aa25.23■■□□□ 1.63
CBX4-203ENST00000494546 LCN12Q6JVE5 192 aa25.23■■□□□ 1.63
CBX4-203ENST00000494546 CXorf58Q96LI9 332 aa25.23■■□□□ 1.63
CBX4-203ENST00000494546 WWC2-AS2Q96NR7 200 aa25.23■■□□□ 1.63
CBX4-203ENST00000494546 WT1-ASQ06250 92 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 HSD17B13Q7Z5P4 300 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms