RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 H2AFB1P0C5Y9 115 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 COX7A1P24310 79 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 PRCDQ00LT1 54 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 GUK1Q16774 197 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 RITA1Q96K30 269 aa13.37□□□□□ -0.27
ATG4B-225ENST00000494465 ASH1LQ9NR48 2969 aaKnown RBP13.37□□□□□ -0.27
ATG4B-225ENST00000494465 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 ETV3LQ6ZN32 361 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 CARHSP1Q9Y2V2 147 aaKnown RBP13.36□□□□□ -0.27
ATG4B-225ENST00000494465 LOC105371242A0A075B767 164 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 hCG_1809904A0A1W2PP81 198 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 A0A1W2PPE2 198 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 A0A1W2PR64 198 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 A0A1W2PRV1 198 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 OPN1MWP04001 364 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 OPN1MW2P0DN77 364 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 OPN1MW3P0DN78 364 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 FGF7P21781 194 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 MC5RP33032 325 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 RAB13P51153 203 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 HNF4GQ14541 408 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 LFNGQ8NES3 379 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
ATG4B-225ENST00000494465 F8W036 122 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 LY6LH3BQJ8 138 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 ARF6P62330 175 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 TLE4Q04727 773 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 LDLRAD2Q5SZI1 272 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 PNKDQ8N490 385 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 TMEM167AQ8TBQ9 72 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 SEC11CQ9BY50 192 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 NPCDR1Q9BY65 106 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 IGHV3-72A0A0B4J1Y9 119 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 A0A1B0GW64 132 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 IGKV1D-33P01593 117 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 IGKV1-33P01594 117 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 CD1BP29016 333 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 DEFA5Q01523 94 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 HINT2Q9BX68 163 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
ATG4B-225ENST00000494465 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 IGHV1-3A0A0C4DH29 117 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 M0R1W7 72 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 CA2P00918 260 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 NPY1RP25929 384 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 ZFP36P26651 326 aaKnown RBP13.34□□□□□ -0.27
ATG4B-225ENST00000494465 TMEM41BQ5BJD5 291 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 OR4A5Q8NH83 315 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 PLEKHA3Q9HB20 300 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 E7EUB6 86 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 USF1P22415 310 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-225ENST00000494465 ELLP55199 621 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-225ENST00000494465 RAB11AP62491 216 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 RPL8P62917 257 aaKnown RBP13.34□□□□□ -0.27
ATG4B-225ENST00000494465 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 RCC1LQ96I51 464 aaKnown RBP13.34□□□□□ -0.27
ATG4B-225ENST00000494465 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 SIRT7Q9NRC8 400 aa13.34□□□□□ -0.27
ATG4B-225ENST00000494465 IGHV2-5P01817 119 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 BSXQ3C1V8 233 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 OR11H6Q8NGC7 330 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 VSTM2AQ8TAG5 236 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 MBD3L1Q8WWY6 194 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 EIF5A2Q9GZV4 153 aaKnown RBP13.33□□□□□ -0.28
ATG4B-225ENST00000494465 TPSG1Q9NRR2 321 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 KIAA1456Q9P272 454 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 PLXNB1O43157 2135 aa13.33□□□□□ -0.28
ATG4B-225ENST00000494465 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 GOSR1O95249 250 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 IFNA4P05014 189 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 RAB2AP61019 212 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 DLK1P80370 383 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 PEA15Q15121 130 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 TREML4Q6UXN2 200 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 RPP25LQ8N5L8 163 aaKnown RBP13.32□□□□□ -0.28
ATG4B-225ENST00000494465 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 RARRES2Q99969 163 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-225ENST00000494465 AMMECR1Q9Y4X0 333 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-225ENST00000494465 INSIG2Q9Y5U4 225 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 PRTN3P24158 256 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 LGALS7P47929 136 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 ZNF843Q8N446 348 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 C17orf50Q8WW18 174 aa13.32□□□□□ -0.28
ATG4B-225ENST00000494465 MYO18BQ8IUG5 2567 aa13.31□□□□□ -0.28
ATG4B-225ENST00000494465 A0A1W2PPI3 338 aa13.31□□□□□ -0.28
ATG4B-225ENST00000494465 ENSAO43768 121 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms