RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IL1F10Q8WWZ1 152 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 PYDC1Q8WXC3 89 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 GHSRQ92847 366 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 GALMQ96C23 342 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ABHD14BQ96IU4 210 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 Q96MT0 163 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 YPEL2Q96QA6 119 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 MYCBPQ99417 103 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 FAAP24Q9BTP7 215 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 PARP12Q9H0J9 701 aaKnown RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 CST11Q9H112 138 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 SPACA1Q9HBV2 294 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 METTL1Q9UBP6 276 aaKnown RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 NSG2Q9Y328 171 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ORC6Q9Y5N6 252 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 GMPPBQ9Y5P6 360 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 SMIM1B2RUZ4 78 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 H0Y980 276 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 ARPC1BO15143 372 aaKnown RBP3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CIDEAO60543 219 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CDK2AP2O75956 126 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CNIH1O95406 144 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 BRI3O95415 125 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 LALBAP00709 142 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CA2P00918 260 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 APELAP0DMC3 54 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 MGMTP16455 207 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CEACAM6P40199 344 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-219ENST00000494323 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-219ENST00000494323 HTD2P86397 168 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 PJVKQ0ZLH3 352 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 MRPL28Q13084 256 aaKnown RBP3.87□□□□□ -1.79
PTCD3-219ENST00000494323 FXYD3Q14802 87 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 PSG5Q15238 335 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CCDC58Q4VC31 144 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 PYHIN1Q6K0P9 492 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF562Q6V9R5 426 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 GTSCR1Q86UQ5 136 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CBR4Q8N4T8 237 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 OR9G4Q8NGQ1 327 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 GRPEL2Q8TAA5 225 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 SLC29A1Q99808 456 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 SULT4A1Q9BR01 284 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 IFI27L2Q9H2X8 130 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 PLEKHA3Q9HB20 300 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 BABAM2Q9NXR7 383 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 CLEC2DQ9UHP7 191 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 RPL36Q9Y3U8 105 aaKnown RBP3.87□□□□□ -1.79
PTCD3-219ENST00000494323 SELENOKQ9Y6D0 94 aa3.87□□□□□ -1.79
PTCD3-219ENST00000494323 PNMA8CA0A1B0GUJ8 204 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 LOC100130705A0A1B0GUX0 176 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 RBMY1BA6NDE4 496 aaKnown RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 RBMY1EA6NEQ0 496 aaKnown RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 H0YJW9 148 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 RAB29O14966 203 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 CA11O75493 328 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 GPX5O75715 221 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 SC5DO75845 299 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 ATP5HO75947 161 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 LY6G6CO95867 125 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 IGKV1-16P04430 117 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 GLAP06280 429 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 CD7P09564 240 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 RBMY1DP0C7P1 496 aaKnown RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 ZP3P21754 424 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 CAPGP40121 348 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 HERV-K104P61576 105 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 RPS11P62280 158 aaKnown RBP eCLIP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 SRSF9Q13242 221 aaKnown RBP eCLIP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 TMEM30BQ3MIR4 351 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 Q499Y3 187 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 DMKNQ6E0U4 476 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 OR10K2Q6IF99 312 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 TMPRSS11AQ6ZMR5 421 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 LINC00322Q6ZN03 302 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 C6orf201Q7Z4U5 140 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 DEFB125Q8N687 156 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 TCTEX1D1Q8N7M0 179 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 APH1BQ8WW43 257 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 AGMATQ9BSE5 352 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 WFDC10AQ9H1F0 79 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 SDF2L1Q9HCN8 221 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 FGF20Q9NP95 211 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 PIPOXQ9P0Z9 390 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 ABRACLQ9P1F3 81 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 CKLFQ9UBR5 152 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 PEF1Q9UBV8 284 aaKnown RBP3.86□□□□□ -1.79
PTCD3-219ENST00000494323 JPT1Q9UK76 154 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 WASHC3Q9Y3C0 194 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 LRRC42Q9Y546 428 aa3.86□□□□□ -1.79
PTCD3-219ENST00000494323 A0A0G2JLM5 398 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 ERICH4A6NGS2 130 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 OR5H14A6NHG9 310 aa3.85□□□□□ -1.79
PTCD3-219ENST00000494323 MSGN1A6NI15 193 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms