RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 BRI3O95415 125 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 KRASP01116 189 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 PPP5CP53041 499 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 SYNJ2BPP57105 145 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 OR2B8PP59922 312 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 ATP5G2Q06055 141 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 IL18Q14116 193 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
ATG4B-224ENST00000494132 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 ACSM6Q6P461 480 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 OR4A5Q8NH83 315 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 CD300LFQ8TDQ1 290 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 RSRP1Q9BUV0 290 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 COMMD9Q9P000 198 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.61
ATG4B-224ENST00000494132 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 CCDC160A6NGH7 325 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 IFNA6P05013 189 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 PGAM2P15259 253 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 ZP3P21754 424 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 PSMB6P28072 239 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 ERVK-16P61578 105 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 SCGB2B2Q4G0G5 96 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 OR10W1Q8NGF6 305 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 BCL7BQ9BQE9 202 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 COMMD5Q9GZQ3 224 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 FBXL7Q9UJT9 491 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-224ENST00000494132 CEPT1Q9Y6K0 416 aa11.26□□□□□ -0.61
ATG4B-224ENST00000494132 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 PPP5D1E7EU14 171 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 GABARAPH6UMI1 98 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 NDUFB8O95169 186 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 SPNP16150 400 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 INSL3P51460 131 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 SLC25A42Q86VD7 318 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 SLC38A6Q8IZM9 456 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 FANCD2OSQ96PS1 177 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 OR4C12Q96R67 309 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
ATG4B-224ENST00000494132 SLIRPQ9GZT3 109 aaKnown RBP11.25□□□□□ -0.61
ATG4B-224ENST00000494132 DNAH9Q9NYC9 4486 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 BMPR1BO00238 502 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 RAB3DO95716 219 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 HLA-AP01891 365 aaKnown RBP11.24□□□□□ -0.61
ATG4B-224ENST00000494132 DEFA4P12838 97 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 CTRB1P17538 263 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 S100GP29377 79 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 UCP3P55916 312 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 TAS2R19P59542 299 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 KLF5Q13887 457 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-224ENST00000494132 CTRB2Q6GPI1 263 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 TMEM229BQ8NBD8 167 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 C15orf40Q8WUR7 153 aa11.24□□□□□ -0.61
ATG4B-224ENST00000494132 ZMAT5Q9UDW3 170 aaKnown RBP11.24□□□□□ -0.61
ATG4B-224ENST00000494132 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 DBX1A6NMT0 343 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 CD74P04233 296 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 CRYGCP07315 174 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 PIGPP57054 158 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 CD69Q07108 199 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 ARRDC1Q8N5I2 433 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 OR9G4Q8NGQ1 327 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 ELOVL1Q9BW60 279 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 QTRT1Q9BXR0 403 aaKnown RBP11.23□□□□□ -0.61
ATG4B-224ENST00000494132 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
ATG4B-224ENST00000494132 DMRT1Q9Y5R6 373 aa11.23□□□□□ -0.61
ATG4B-224ENST00000494132 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
ATG4B-224ENST00000494132 MFSD2BA6NFX1 497 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 TPPPO94811 219 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 EDN2P20800 178 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
ATG4B-224ENST00000494132 WT1-ASQ06250 92 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 IZUMO4Q1ZYL8 232 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms