RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PQLC2LA1A4F0 135 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 NPIPB3Q92617 1050 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 UQCR10Q9UDW1 63 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 HAX1O00165 279 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 CECR9P0C854 216 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 FBLN5Q9UBX5 448 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 DMRT1Q9Y5R6 373 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 KIR2DL4Q99706 377 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 SIGLEC12Q96PQ1 595 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 MYOFQ9NZM1 2061 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 ACSF3Q4G176 576 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-207ENST00000494090 FAM159AQ6UWV7 190 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 CLDND2Q8NHS1 167 aa16.21■□□□□ 0.19
COL27A1-207ENST00000494090 SSBP3Q9BWW4 388 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-207ENST00000494090 LOC285556D6RIA3 1793 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 RBFOX2O43251 390 aaKnown RBP eCLIP16.2■□□□□ 0.181e-6■■■□□ 14.7
COL27A1-207ENST00000494090 SRIP30626 198 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 RSPO4Q2I0M5 234 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-207ENST00000494090 FAM209BQ5JX69 171 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 NPCDR1Q9BY65 106 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 RAXQ9Y2V3 346 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 C12orf77C9JDV5 145 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 IL4P05112 153 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 PRSS8Q16651 343 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 C12orf54Q6X4T0 127 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 OR10AG1Q8NH19 301 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 FLVCR1-AS1Q8TAF5 88 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 TRGV3P03979 118 aa16.2■□□□□ 0.18
COL27A1-207ENST00000494090 REPIN1Q9BWE0 567 aaKnown RBP16.2■□□□□ 0.18
COL27A1-207ENST00000494090 IGKV3D-15A0A087WSY6 115 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 TCF21O43680 179 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 IGKV3-15P01624 115 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 LGALS3P17931 250 aaKnown RBP16.19■□□□□ 0.18
COL27A1-207ENST00000494090 SAMD13Q5VXD3 122 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 MRPL13Q9BYD1 178 aaKnown RBP16.19■□□□□ 0.18
COL27A1-207ENST00000494090 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 H7C1H1 209 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 DLX6P56179 175 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 CYP2G1PQ6ZSU1 146 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 FOLR2P14207 255 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 IMMP1LQ96LU5 166 aa16.19■□□□□ 0.18
COL27A1-207ENST00000494090 PPP1R17O96001 155 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 REG1AP05451 166 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 IL6RP08887 468 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-207ENST00000494090 IGLV3-12A0A075B6K2 115 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 CELA3AP09093 270 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 CSRP1P21291 193 aaKnown RBP16.18■□□□□ 0.18
COL27A1-207ENST00000494090 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 SRP19P09132 144 aaKnown RBP16.18■□□□□ 0.18
COL27A1-207ENST00000494090 ZNRF1Q8ND25 227 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 FAM27E3Q08E93 113 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 RPL39P5Q59GN2 51 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 TMEM183AQ8IXX5 376 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 SLC25A28Q96A46 364 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 RP1P56715 2156 aa16.18■□□□□ 0.18
COL27A1-207ENST00000494090 UQCRFS1P47985 274 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 HINT1P49773 126 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-207ENST00000494090 MRPL14Q6P1L8 145 aaKnown RBP16.17■□□□□ 0.18
COL27A1-207ENST00000494090 RTN4RQ9BZR6 473 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 IFI27L2Q9H2X8 130 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 IGHV2OR16-5A0A0B4J2B6 119 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 SPTBP11277 2137 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 LCN2P80188 198 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 ZNF56Q15929 161 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 GOLT1AQ6ZVE7 132 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 OR10S1Q8NGN2 331 aa16.17■□□□□ 0.18
COL27A1-207ENST00000494090 LCTP09848 1927 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 HIST1H1AQ02539 215 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-207ENST00000494090 CENPWQ5EE01 88 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 PDCD11Q14690 1871 aaKnown RBP16.16■□□□□ 0.18
COL27A1-207ENST00000494090 K7ERU9 68 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 FAM168AQ92567 244 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 GEMIN7Q9H840 131 aaKnown RBP16.16■□□□□ 0.18
COL27A1-207ENST00000494090 KBTBD11-OT1A0A1B0GTJ5 212 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 TDRD6O60522 2096 aaKnown RBP16.16■□□□□ 0.18
COL27A1-207ENST00000494090 A0A0G2JMZ2 1700 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
COL27A1-207ENST00000494090 CCL1P22362 96 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 GPX4P36969 197 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-207ENST00000494090 ABHD17AQ96GS6 310 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 AKIRIN1Q9H9L7 192 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-207ENST00000494090 EFEMP2O95967 443 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 HLA-DRB1P01911 266 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 KIAA1644Q3SXP7 199 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 OR4A47Q6IF82 309 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 BIVMQ86UB2 503 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 OR4X2Q8NGF9 303 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 RRHO14718 337 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 FABP2P12104 132 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 LINC00305Q7Z4B0 112 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 RNF126Q9BV68 326 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 LINC00312Q9Y6C7 94 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 A0A087WWC5 75 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 MPZP25189 248 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 SLC25A34Q6PIV7 304 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 IQCF6A8MYZ5 107 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 GAS1P54826 345 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 BSPH1Q075Z2 132 aa16.15■□□□□ 0.18
COL27A1-207ENST00000494090 ZNF837Q96EG3 531 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-207ENST00000494090 C18orf12Q96KH6 178 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms