RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 OR51B2Q9Y5P1 312 aa11.84□□□□□ -0.51
ACTB-213ENST00000493945 C5orf51A6NDU8 294 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 FAM90A26D6RGX4 464 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 WRBO00258 174 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 IGKV1-5P01602 117 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 CX3CL1P78423 397 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 CYCSP99999 105 aaKnown RBP11.83□□□□□ -0.52
ACTB-213ENST00000493945 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 LYZL2Q7Z4W2 148 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 Q8N2B8 174 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 GRPEL2Q8TAA5 225 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 TMEM158Q8WZ71 300 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 MED28Q9H204 178 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 TPSG1Q9NRR2 321 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
ACTB-213ENST00000493945 SVEP1Q4LDE5 3571 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 IGHV7-81A0A0B4J1V7 117 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 TRAPPC2P0DI81 140 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 TRAPPC2BP0DI82 140 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 HKR1P10072 659 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
ACTB-213ENST00000493945 OR2B8PP59922 312 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 BLCAPP62952 87 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 RELBQ01201 579 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 COMMD1Q8N668 190 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 ASB13Q8WXK3 278 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 FYTTD1Q96QD9 318 aaKnown RBP11.82□□□□□ -0.52
ACTB-213ENST00000493945 ZNF702PQ9H963 129 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 JMJD1CQ15652 2540 aa11.82□□□□□ -0.52
ACTB-213ENST00000493945 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 AMY1AP04745 511 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 IGF1P05019 195 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
ACTB-213ENST00000493945 OR9G9P0C7N8 305 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 P0C879 139 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 SPCS3P61009 180 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 HSPE1P61604 102 aaKnown RBP11.81□□□□□ -0.52
ACTB-213ENST00000493945 IAH1Q2TAA2 248 aaPredicted RBP11.81□□□□□ -0.52
ACTB-213ENST00000493945 Q6ZSV7 163 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 GPR146Q96CH1 333 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 CIB3Q96Q77 187 aaPredicted RBP11.81□□□□□ -0.52
ACTB-213ENST00000493945 HINT2Q9BX68 163 aa11.81□□□□□ -0.52
ACTB-213ENST00000493945 TNCP24821 2201 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 DBX1A6NMT0 343 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 GOSR2O14653 212 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 PET100P0DJ07 73 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
ACTB-213ENST00000493945 RPP30P78346 268 aaKnown RBP11.8□□□□□ -0.52
ACTB-213ENST00000493945 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
ACTB-213ENST00000493945 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 AKIRIN2Q53H80 203 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 FBLN7Q53RD9 439 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 UNQ5815/PRO19632Q6UWF5 114 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 NOXA1Q86UR1 476 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 STPG2Q8N412 459 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 OR1L6Q8NGR2 347 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 HSPB9Q9BQS6 159 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 HIPK2Q9H2X6 1198 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
ACTB-213ENST00000493945 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
ACTB-213ENST00000493945 CLPSL1A2RUU4 121 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 ADAP1O75689 374 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
ACTB-213ENST00000493945 NKX2-1P43699 371 aaPredicted RBP11.79□□□□□ -0.52
ACTB-213ENST00000493945 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
ACTB-213ENST00000493945 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 AARDQ4LEZ3 155 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
ACTB-213ENST00000493945 OR4X2Q8NGF9 303 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
ACTB-213ENST00000493945 A0A0B4J293 547 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 TEX50A0A1B0GTY4 177 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 MSGN1A6NI15 193 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 SH2D7A6NKC9 451 aaPredicted RBP11.78□□□□□ -0.52
ACTB-213ENST00000493945 H3BUA1 57 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 FCN1O00602 326 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 SNCAP37840 140 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 RRAS2P62070 204 aaPredicted RBP11.78□□□□□ -0.52
ACTB-213ENST00000493945 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 THYN1Q9P016 225 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 GSKIPQ9P0R6 139 aa11.78□□□□□ -0.52
ACTB-213ENST00000493945 RNF114Q9Y508 228 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms