RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 AKIP1Q9NQ31 210 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 FAM212BQ9NTI7 297 aaPredicted RBP17.39■□□□□ 0.37
SNIP1-203ENST00000493916 ANKRD34BA5PLL1 514 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 MARCH11A6NNE9 402 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 GABARAPH6UMI1 98 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 CD3DP04234 171 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 IFNA6P05013 189 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 CRYGCP07315 174 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 ERVK-16P61578 105 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 SSBP1Q04837 148 aaKnown RBP17.38■□□□□ 0.37
SNIP1-203ENST00000493916 ZNF585BQ52M93 769 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 PHLDA2Q53GA4 152 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 LHFPL1Q86WI0 220 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 RABL2AQ9UBK7 228 aaPredicted RBP17.38■□□□□ 0.37
SNIP1-203ENST00000493916 PEF1Q9UBV8 284 aaKnown RBP17.38■□□□□ 0.37
SNIP1-203ENST00000493916 RABL2BQ9UNT1 228 aa17.38■□□□□ 0.37
SNIP1-203ENST00000493916 DPPA5A6NC42 116 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 CGB1A6NKQ9 187 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 SAP30O75446 220 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 CD74P04233 296 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 MYOD1P15172 320 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 AREGP15514 252 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 ECI1P42126 302 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 OR2B8PP59922 312 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 DCTN2Q13561 401 aaKnown RBP17.37■□□□□ 0.37
SNIP1-203ENST00000493916 KLK9Q2XQG4 91 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 TMEM229BQ8NBD8 167 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 SLIRPQ9GZT3 109 aaKnown RBP17.37■□□□□ 0.37
SNIP1-203ENST00000493916 KLK9Q9UKQ9 250 aa17.37■□□□□ 0.37
SNIP1-203ENST00000493916 TRAV3A0A0B4J244 114 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 CTRB1P17538 263 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 PSMB6P28072 239 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 LPAR6P43657 344 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 TAS2R19P59542 299 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 ATP5G2Q06055 141 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 EXOSC2Q13868 293 aaKnown RBP17.36■□□□□ 0.37
SNIP1-203ENST00000493916 KLF5Q13887 457 aaPredicted RBP17.36■□□□□ 0.37
SNIP1-203ENST00000493916 CTRB2Q6GPI1 263 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 TBC1D26Q86UD7 250 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 SRSF8Q9BRL6 282 aaKnown RBP17.36■□□□□ 0.37
SNIP1-203ENST00000493916 COMMD5Q9GZQ3 224 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 CEPT1Q9Y6K0 416 aa17.36■□□□□ 0.37
SNIP1-203ENST00000493916 CTDSPLO15194 276 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 DHFRP00374 187 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 TRBV12-3P01733 135 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 FAM209BQ5JX69 171 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 THOC7Q6I9Y2 204 aaKnown RBP17.35■□□□□ 0.37
SNIP1-203ENST00000493916 SMIM4Q8WVI0 70 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 ZNF486Q96H40 463 aaPredicted RBP17.35■□□□□ 0.37
SNIP1-203ENST00000493916 DIRAS2Q96HU8 199 aa17.35■□□□□ 0.37
SNIP1-203ENST00000493916 ZNF256Q9Y2P7 627 aaPredicted RBP17.35■□□□□ 0.37
SNIP1-203ENST00000493916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.34■□□□□ 0.37
SNIP1-203ENST00000493916 OR2J3O76001 311 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 PTBP1P26599 531 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNIP1-203ENST00000493916 RND3P61587 244 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 C15orf32Q32M92 178 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 DEFB121Q5J5C9 76 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 C19orf35Q6ZS72 473 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 FANCD2OSQ96PS1 177 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 PRR25Q96S07 402 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 ELOVL1Q9BW60 279 aa17.34■□□□□ 0.37
SNIP1-203ENST00000493916 QTRT1Q9BXR0 403 aaKnown RBP17.34■□□□□ 0.37
SNIP1-203ENST00000493916 C6orf62Q9GZU0 229 aaPredicted RBP17.34■□□□□ 0.37
SNIP1-203ENST00000493916 IGLC7A0M8Q6 106 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 KRASP01116 189 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 RPA2P15927 270 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 HIST1H1BP16401 226 aaKnown RBP17.33■□□□□ 0.36
SNIP1-203ENST00000493916 G6PCP35575 357 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 STEAP1BQ6NZ63 245 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 OR4D10Q8NGI6 311 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 NXF2Q9GZY0 626 aaKnown RBP17.33■□□□□ 0.36
SNIP1-203ENST00000493916 FBXL7Q9UJT9 491 aa17.33■□□□□ 0.36
SNIP1-203ENST00000493916 RAB3DO95716 219 aa17.32■□□□□ 0.36
SNIP1-203ENST00000493916 PGAM2P15259 253 aa17.32■□□□□ 0.36
SNIP1-203ENST00000493916 IL18Q14116 193 aa17.32■□□□□ 0.36
SNIP1-203ENST00000493916 OR6Q1Q8NGQ2 317 aa17.32■□□□□ 0.36
SNIP1-203ENST00000493916 OR4C12Q96R67 309 aa17.32■□□□□ 0.36
SNIP1-203ENST00000493916 BMPR1BO00238 502 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 REG1AP05451 166 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 SYNJ2BPP57105 145 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 MEF2DQ14814 521 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 RPEL1Q2QD12 228 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 HSD17B13Q7Z5P4 300 aaPredicted RBP17.31■□□□□ 0.36
SNIP1-203ENST00000493916 OR9G4Q8NGQ1 327 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 OR1L8Q8NGR8 309 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 TERB2Q8NHR7 220 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 TSC22D3Q99576 134 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 LSM4Q9Y4Z0 139 aaKnown RBP17.31■□□□□ 0.36
SNIP1-203ENST00000493916 COL7A1Q02388 2944 aa17.31■□□□□ 0.36
SNIP1-203ENST00000493916 IGLV11-55A0A075B6I3 123 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 TEX50A0A1B0GTY4 177 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 SNAPC5O75971 98 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 TRAPPC2P0DI81 140 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 TRAPPC2BP0DI82 140 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 DEFA4P12838 97 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 PPP5CP53041 499 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 MCFD2Q8NI22 146 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 RSL24D1Q9UHA3 163 aaKnown RBP17.3■□□□□ 0.36
SNIP1-203ENST00000493916 PRNDQ9UKY0 176 aa17.3■□□□□ 0.36
SNIP1-203ENST00000493916 H0Y980 276 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms