RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PRTN3P24158 256 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 HOXD3P31249 432 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 OCIAD2Q56VL3 154 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM92Q6UXU6 159 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 PPP1R27Q86WC6 154 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 ASCL2Q99929 193 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SEPSECSQ9HD40 501 aaKnown RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 MYH1P12882 1939 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 CCDC88AQ3V6T2 1871 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SCO2A0A1W2PP80 73 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 CISD3P0C7P0 127 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 COL9A1P20849 921 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SEC11AP67812 179 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 FUT5Q11128 374 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 GFI1BQ5VTD9 330 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 OR9G4Q8NGQ1 327 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 OR52E5Q8NH55 327 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 ZPLD1Q8TCW7 415 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF721Q8TF20 911 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 CITED1Q99966 193 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TRGV11A0A075B6L2 103 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TRAV9-2A0A087WT02 112 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SMAD7O15105 426 aaKnown RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 ZNHIT1O43257 154 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 DUSP14O95147 198 aaKnown RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3-48P01763 117 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 LDLRAD2Q5SZI1 272 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 FAM219BQ5XKK7 198 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 POC1AQ8NBT0 407 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SCARF2Q96GP6 870 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 DNAJC30Q96LL9 226 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 Q9H3A6 140 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 A0A0J9YW62 118 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 HRKO00198 91 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 EGR4Q05215 589 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM167AQ8TBQ9 72 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 MRAPQ8TCY5 172 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM54Q969K7 222 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 C21orf62Q9NYP8 219 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 EPDR1Q9UM22 224 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 SSC5DA1L4H1 1573 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 LRRC37A3O60309 1634 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 TRAV5A0A0B4J249 113 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 HLA-DQB1P01920 261 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 MYOD1P15172 320 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ERVK11-1P61568 191 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 C1orf162Q8NEQ5 155 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-221ENST00000493795 PPP1R3EQ9H7J1 279 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 A0A087WWC5 75 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 TRAV8-1A0A0A6YYK1 113 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 GGTLC1Q9BX51 225 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 C5orf66Q9H5L9 145 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ANAPC10Q9UM13 185 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 AKAP12Q02952 1782 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 LRP6O75581 1613 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 IGKV1D-42A0A075B6H8 117 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ITGB1BP1O14713 200 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 PEX11BO96011 259 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 NGFRP08138 427 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 C1orf100Q5SVJ3 147 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 OSR1Q8TAX0 266 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-221ENST00000493795 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 NHLRC3Q5JS37 347 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 CLEC19AQ6UXS0 136 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ZAR1Q86SH2 424 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 DRAM1Q8N682 238 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ARPC1AQ92747 370 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
BRCA1-221ENST00000493795 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 SPANXA1Q9NS26 97 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 ARFGEF2Q9Y6D5 1785 aa6.68□□□□□ -1.34
BRCA1-221ENST00000493795 HIGD1CA8MV81 97 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 IGFBP2P18065 325 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 SLC25A47Q6Q0C1 308 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-221ENST00000493795 B9A039 149 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 PAX4O43316 350 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 PPBPP02775 128 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 C2orf82Q6UX34 121 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 PLSCR4Q9NRQ2 329 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 SMPXQ9UHP9 88 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 CARHSP1Q9Y2V2 147 aaKnown RBP6.67□□□□□ -1.34
BRCA1-221ENST00000493795 MYH4Q9Y623 1939 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 INS-IGF2F8WCM5 200 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 SERF1AO75920 110 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 INSP01308 110 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 EFNB1P98172 346 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 KLF14Q8TD94 323 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-221ENST00000493795 Q96M66 194 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 SPAARA0A1B0GVQ0 90 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 A0A1W2PRS3 328 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 ERVH48-1M5A8F1 160 aa6.67□□□□□ -1.34
BRCA1-221ENST00000493795 COX5BP10606 129 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms