RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RAC3P60763 192 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 Q6P435 159 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 CLCF1Q9UBD9 225 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 MED12LQ86YW9 2145 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 OR2H2O95918 312 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 ZNF497Q6ZNH5 498 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 ZNF645Q8N7E2 425 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 OR52L2PQ8NGH6 319 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 SF3B5Q9BWJ5 86 aaKnown RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 C2orf70A6NJV1 201 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 K7ERU9 68 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 ACTL6BO94805 426 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 LINC00869P0C866 280 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 MGST1P10620 155 aaKnown RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 NPY1RP25929 384 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 GPR6P46095 362 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 UBE2G1P62253 170 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 PSG9Q00887 426 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 EFNB3Q15768 340 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 BVES-AS1Q5T3Y7 98 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 RNASEKQ6P5S7 137 aaKnown RBP9.72□□□□□ -0.85
HDAC4-210ENST00000493582 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 ABHD3Q8WU67 409 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 FAM168AQ92567 244 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 SARAFQ96BY9 339 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 IL19Q9UHD0 177 aa9.72□□□□□ -0.85
HDAC4-210ENST00000493582 hDV102S1A0JD36 115 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 CLDN18P56856 261 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 RPL8P62917 257 aaKnown RBP9.71□□□□□ -0.85
HDAC4-210ENST00000493582 TBR1Q16650 682 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 SPACA3Q8IXA5 215 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 NHLRC2Q8NBF2 726 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 SCCPDHQ8NBX0 429 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.85
HDAC4-210ENST00000493582 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.85
HDAC4-210ENST00000493582 SH2D7A6NKC9 451 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-210ENST00000493582 SCRG1O75711 98 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 LINC00596Q86U02 117 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 ABHD12Q8N2K0 398 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 BRWD1Q9NSI6 2320 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 ZNF503-AS2A6NEH8 195 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 LINC00473A8K010 186 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 RAB29O14966 203 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 OR9G9P0C7N8 305 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 CEBPDP49716 269 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-210ENST00000493582 FOXG1P55316 489 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-210ENST00000493582 DEFB125Q8N687 156 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 C11orf52Q96A22 123 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 ZNF331Q9NQX6 463 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-210ENST00000493582 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
HDAC4-210ENST00000493582 AHRRA9YTQ3 701 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 CIDEAO60543 219 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 RAC2P15153 192 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
HDAC4-210ENST00000493582 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-210ENST00000493582 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-210ENST00000493582 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 TOX4O94842 621 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-210ENST00000493582 TIGITQ495A1 244 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 ZNF841Q6ZN19 808 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 OR2T6Q8NHC8 308 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 C1orf159Q96HA4 380 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 POM121L2Q96KW2 1035 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 GCM1Q9NP62 436 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 TNFRSF19Q9NS68 423 aa9.7□□□□□ -0.86
HDAC4-210ENST00000493582 A0A1W2PR77 199 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
HDAC4-210ENST00000493582 GNG3P63215 75 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 CATR1Q13166 79 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 C1orf185Q5T7R7 199 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 VKORC1L1Q8N0U8 176 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 PHF7Q9BWX1 381 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-210ENST00000493582 FSCN3Q9NQT6 498 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 M0R1X1 148 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 MPDU1O75352 247 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 OR10J4P0C629 311 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 HOXA4Q00056 320 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-210ENST00000493582 PSG5Q15238 335 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 MOB1BQ7L9L4 216 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 STPG3Q8N7X2 389 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 MCRIP2Q9BUT9 160 aaKnown RBP9.69□□□□□ -0.86
HDAC4-210ENST00000493582 OSTCQ9NRP0 149 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 RARRES3Q9UL19 164 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 ANKRD30BLA7E2S9 258 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 DEFB108AA8MXU0 73 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 CORTO00230 105 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 CDIPTO14735 213 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 COX19Q49B96 90 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms