RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 KIF13BQ9NQT8 1826 aa2.79□□□□□ -1.96
VPS13A-212ENST00000493341 NAV1Q8NEY1 1877 aa2.79□□□□□ -1.96
VPS13A-212ENST00000493341 A0A1B0GV50 99 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 OR4C45A6NMZ5 311 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 DENRO43583 198 aaKnown RBP2.78□□□□□ -1.96
VPS13A-212ENST00000493341 SLC25A20O43772 301 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 HAND1O96004 215 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 CD7P09564 240 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 C4BP0C0L5 1744 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 OPRM1P35372 400 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 GZMMP51124 257 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 B2MP61769 119 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 OR4K13Q8NH42 304 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 KLK6Q92876 244 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 SFRP2Q96HF1 295 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 MRC1P22897 1456 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 SCN4AP35499 1836 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 TJP1Q07157 1748 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 PQLC2LA1A4F0 135 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 OR6C6A6NF89 314 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 APOMO95445 188 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 INAFM2P0DMQ5 153 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 CRABP1P29762 137 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 AKR1C2P52895 323 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 PSME3P61289 254 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 FGF12P61328 243 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 BTN3A2P78410 334 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 EIF4EBP1Q13541 118 aaPredicted RBP2.78□□□□□ -1.96
VPS13A-212ENST00000493341 LGALSLQ3ZCW2 172 aaPredicted RBP2.78□□□□□ -1.96
VPS13A-212ENST00000493341 RAB2BQ8WUD1 216 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 CPNE2Q96FN4 548 aaPredicted RBP2.78□□□□□ -1.96
VPS13A-212ENST00000493341 CCL13Q99616 98 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 ZNF391Q9UJN7 358 aa2.78□□□□□ -1.96
VPS13A-212ENST00000493341 FAM32AQ9Y421 112 aaKnown RBP2.78□□□□□ -1.96
VPS13A-212ENST00000493341 COL27A1Q8IZC6 1860 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-212ENST00000493341 C4AP0C0L4 1744 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 KIAA1551Q9HCM1 1747 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 TMEM238C9JI98 176 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 BHLHE40O14503 412 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 LECT2O14960 151 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 NOS1APO75052 506 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-212ENST00000493341 IGKV2D-28P01615 120 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 ZNF286BP0CG31 522 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 DEFA1P59665 94 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 PLPPR5Q32ZL2 321 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 KPRPQ5T749 579 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-212ENST00000493341 Q6ZQT7 251 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 SLC35F6Q8N357 371 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 ZFAND2AQ8N6M9 145 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 LINC00167Q96N53 147 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 KIFC1Q9BW19 673 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 C1QTNF6Q9BXI9 259 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 PRRC2AP48634 2157 aaKnown RBP2.77□□□□□ -1.97
VPS13A-212ENST00000493341 CHD5Q8TDI0 1954 aa2.77□□□□□ -1.97
VPS13A-212ENST00000493341 DLG5Q8TDM6 1919 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 CST2P09228 141 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 ESDP10768 282 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 TAS2R45P59539 299 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 PSG4Q00888 419 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 DR1Q01658 176 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 MRPL51Q4U2R6 128 aaKnown RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 LYZL2Q7Z4W2 148 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 PACRGLQ8N7B6 248 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 BPIFB6Q8NFQ5 453 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 GNPNAT1Q96EK6 184 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 CYYR1Q96J86 154 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 NMNAT1Q9HAN9 279 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 ENY2Q9NPA8 101 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 MRPL27Q9P0M9 148 aaKnown RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 NRXN2Q9P2S2 1712 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 ARFGEF1Q9Y6D6 1849 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 ZNF878C9JN71 531 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 COX7A2LO14548 114 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 IGHMP01871 453 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 TTRP02766 147 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 HIST1H1TP22492 207 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 RUNX1Q01196 453 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 ZNF660Q6AZW8 331 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-212ENST00000493341 C20orf196Q8IYI0 205 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 C3orf22Q8N5N4 141 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 OR2D3Q8NGH3 330 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 CNBD2Q96M20 576 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 GID8Q9NWU2 228 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 SNX12Q9UMY4 172 aa2.76□□□□□ -1.97
VPS13A-212ENST00000493341 KDM6AO15550 1401 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-212ENST00000493341 DLEC1Q9Y238 1755 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 NOTCH3Q9UM47 2321 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 IGHV1-69-2A0A0G2JMI3 117 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 FAM236DA0A1B0GTK5 79 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 A0A1B0GVY2 172 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 OR4C46A6NHA9 309 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 A8MWP6 167 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 CRYGDP07320 174 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 FAM236CP0DP71 79 aa2.75□□□□□ -1.97
VPS13A-212ENST00000493341 RPL5P46777 297 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 883.1 ms