RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 FAM212BQ9NTI7 297 aaPredicted RBP10.4□□□□□ -0.74
IRF1-210ENST00000493208 TMEM140Q9NV12 185 aa10.4□□□□□ -0.74
IRF1-210ENST00000493208 GAR1Q9NY12 217 aaKnown RBP10.4□□□□□ -0.74
IRF1-210ENST00000493208 PRNDQ9UKY0 176 aa10.4□□□□□ -0.74
IRF1-210ENST00000493208 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 MARCH11A6NNE9 402 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 A8MZ25 164 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 LGALS9O00182 355 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 PMP2P02689 132 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 RLN1P04808 185 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 FCER2P06734 321 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 FRMD6-AS1P0C7T7 363 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 TRAPPC2P0DI81 140 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 TRAPPC2BP0DI82 140 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 NAT1P18440 290 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 ARL3P36405 182 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 MRGPRG-AS1Q2M3A8 158 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 ANKRD55Q3KP44 614 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 SLC38A6Q8IZM9 456 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 DGCR14Q96DF8 476 aaKnown RBP10.39□□□□□ -0.75
IRF1-210ENST00000493208 DNAH3Q8TD57 4116 aa10.39□□□□□ -0.75
IRF1-210ENST00000493208 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 UPK2O00526 184 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 PGLYRP1O75594 196 aaPredicted RBP10.38□□□□□ -0.75
IRF1-210ENST00000493208 PRH1P02810 166 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 CTRB1P17538 263 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 TBPP20226 339 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 GNRHRP30968 328 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 HRH1P35367 487 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 RFX2P48378 723 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 SLC16A13Q7RTY0 426 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 GPHB5Q86YW7 130 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 OR5B3Q8NH48 314 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 LSM10Q969L4 123 aaKnown RBP10.38□□□□□ -0.75
IRF1-210ENST00000493208 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 ATP6V0BQ99437 205 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
IRF1-210ENST00000493208 ANAPC10Q9UM13 185 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
IRF1-210ENST00000493208 ZNF320A2RRD8 509 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 BMPR1BO00238 502 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
IRF1-210ENST00000493208 SERPINE2P07093 398 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 CSN3P07498 182 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 IL6RP08887 468 aaPredicted RBP10.37□□□□□ -0.75
IRF1-210ENST00000493208 IGHV4-30-4P0DP06 118 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 PTHLHP12272 177 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 MYOD1P15172 320 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 RPA2P15927 270 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 ZNF182P17025 639 aaPredicted RBP10.37□□□□□ -0.75
IRF1-210ENST00000493208 HLA-DMAP28067 261 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
IRF1-210ENST00000493208 VBP1P61758 197 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 ZNF45Q02386 682 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 SNX29P2Q8IUI4 249 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 VN1R17PQ8TDU5 208 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 GPX8Q8TED1 209 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 ZNF486Q96H40 463 aaPredicted RBP10.37□□□□□ -0.75
IRF1-210ENST00000493208 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
IRF1-210ENST00000493208 SORL1Q92673 2214 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
IRF1-210ENST00000493208 S1PR2O95136 353 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 KRASP01116 189 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 TRBV12-3P01733 135 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 OR2B8PP59922 312 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 NCS1P62166 190 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 MRPS10P82664 201 aaKnown RBP10.36□□□□□ -0.75
IRF1-210ENST00000493208 RNASE10Q5GAN6 216 aaKnown RBP10.36□□□□□ -0.75
IRF1-210ENST00000493208 SPSB3Q6PJ21 355 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 PLET1Q6UQ28 207 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 GPR141Q7Z602 305 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 ARRDC1Q8N5I2 433 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 OR4A16Q8NH70 328 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 HINT2Q9BX68 163 aa10.36□□□□□ -0.75
IRF1-210ENST00000493208 MRPS26Q9BYN8 205 aaKnown RBP10.36□□□□□ -0.75
IRF1-210ENST00000493208 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 SCGB2A1O75556 95 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
IRF1-210ENST00000493208 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 AREGP15514 252 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 PTBP1P26599 531 aaKnown RBP eCLIP10.35□□□□□ -0.75
IRF1-210ENST00000493208 TGFBR1P36897 503 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 LPAR6P43657 344 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 ELLP55199 621 aaPredicted RBP10.35□□□□□ -0.75
IRF1-210ENST00000493208 UCP3P55916 312 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 CD81P60033 236 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 DEFA5Q01523 94 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 GUCA2BQ16661 112 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 KLK9Q2XQG4 91 aa10.35□□□□□ -0.75
IRF1-210ENST00000493208 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms