RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CITED1Q99966 193 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 SPIN2BQ9BPZ2 258 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 MGAT4CQ9UBM8 478 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 SH2D7A6NKC9 451 aaPredicted RBP10.64□□□□□ -0.71
MSH6-208ENST00000493177 DBX1A6NMT0 343 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 FGF16O43320 207 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 ACTL6BO94805 426 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 CA2P00918 260 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 CRYGBP07316 175 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 SULT1A3P0DMM9 295 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 SULT1A4P0DMN0 295 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 PROK1P58294 105 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 FCN2Q15485 313 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 C2orf68Q2NKX9 166 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 GSG1LQ6UXU4 331 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 MMD2Q8IY49 270 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 OR1S1Q8NH92 325 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 PDCD10Q9BUL8 212 aa10.64□□□□□ -0.71
MSH6-208ENST00000493177 ZNF430Q9H8G1 570 aaPredicted RBP10.64□□□□□ -0.71
MSH6-208ENST00000493177 FCN1O00602 326 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 NXPH3O95157 252 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 CNIH1O95406 144 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 SIX6O95475 246 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 P0C879 139 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 RRAS2P62070 204 aaPredicted RBP10.63□□□□□ -0.71
MSH6-208ENST00000493177 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
MSH6-208ENST00000493177 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 TNXAQ16473 311 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 PRSS8Q16651 343 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 IAH1Q2TAA2 248 aaPredicted RBP10.63□□□□□ -0.71
MSH6-208ENST00000493177 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 FAM71E2Q8N5Q1 922 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 ABHD5Q8WTS1 349 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 GSKIPQ9P0R6 139 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 PRNDQ9UKY0 176 aa10.63□□□□□ -0.71
MSH6-208ENST00000493177 A0A1B0GU03 582 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 A0A1B0GVG6 124 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 MPTX1A8MV57 137 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OPN1MWP04001 364 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OPN1MW2P0DN77 364 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OPN1MW3P0DN78 364 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 MYOD1P15172 320 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 HLA-GP17693 338 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 KRTAP10-3P60369 221 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 Q6ZRM9 215 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 KLHDC1Q8N7A1 406 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OR5M8Q8NGP6 311 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OR10C1Q96KK4 312 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 HINT2Q9BX68 163 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
MSH6-208ENST00000493177 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.62□□□□□ -0.71
MSH6-208ENST00000493177 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 OR51B2Q9Y5P1 312 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 FBN3Q75N90 2809 aa10.62□□□□□ -0.71
MSH6-208ENST00000493177 IFNA17P01571 189 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 HLA-DRB1P01911 266 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 IL6RP08887 468 aaPredicted RBP10.61□□□□□ -0.71
MSH6-208ENST00000493177 MAS1LP35410 378 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 BLCAPP62952 87 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 FXYD3Q14802 87 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 FOXRED2Q8IWF2 684 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 CADM3Q8N126 398 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 ZBTB8BQ8NAP8 495 aaPredicted RBP10.61□□□□□ -0.71
MSH6-208ENST00000493177 GRPEL2Q8TAA5 225 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 C2orf50Q96LR7 162 aa10.61□□□□□ -0.71
MSH6-208ENST00000493177 FYTTD1Q96QD9 318 aaKnown RBP10.61□□□□□ -0.71
MSH6-208ENST00000493177 ST8SIA3O43173 380 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 AMY1AP04745 511 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 SLC25A6P12236 298 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 CXCL3P19876 107 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 RPL27AP46776 148 aaKnown RBP10.6□□□□□ -0.71
MSH6-208ENST00000493177 CX3CL1P78423 397 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 MRGPRG-AS1Q2M3A8 158 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 SPINK9Q5DT21 86 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 C10orf55Q5SWW7 151 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 OR11H7Q8NGC8 314 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 PARP11Q9NR21 331 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 COA4Q9NYJ1 87 aa10.6□□□□□ -0.71
MSH6-208ENST00000493177 FOXA2Q9Y261 457 aaPredicted RBP10.6□□□□□ -0.71
MSH6-208ENST00000493177 IGHV7-81A0A0B4J1V7 117 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 TEX50A0A1B0GTY4 177 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 FGF2P09038 288 aa10.59□□□□□ -0.71
MSH6-208ENST00000493177 VDAC2P45880 294 aaPredicted RBP10.59□□□□□ -0.71
MSH6-208ENST00000493177 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
MSH6-208ENST00000493177 ZNF562Q6V9R5 426 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms