RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 BORCS7-ASMTA0A0B4J1R7 106 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 SEC11BP0C7V7 166 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 H2BFWTQ7Z2G1 175 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 CIARTQ8N365 385 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 DMBX1Q8NFW5 382 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 GINS3Q9BRX5 216 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 CACNG5Q9UF02 275 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 TBL2Q9Y4P3 447 aaKnown RBP11.38□□□□□ -0.59
PDZRN3-210ENST00000492909 ST8SIA3O43173 380 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 HRASP01112 189 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 TGFAP01135 160 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 P0C879 139 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 NPBWR1P48145 328 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 IZUMO4Q1ZYL8 232 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 OSR1Q8TAX0 266 aaPredicted RBP11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 FLYWCH2Q96CP2 140 aaKnown RBP11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 RHOVQ96L33 236 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 WFDC1Q9HC57 220 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 RCL1Q9Y2P8 373 aaKnown RBP11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
PDZRN3-210ENST00000492909 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 MIDNQ504T8 468 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 TMEM88Q6PEY1 159 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 Q6ZRM9 215 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 COA4Q9NYJ1 87 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 IGHV3-72A0A0B4J1Y9 119 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 PITX3O75364 302 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SPP1P10451 314 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SAA4P35542 130 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SSX2Q16385 188 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 CLEC9AQ6UXN8 241 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 HARBI1Q96MB7 349 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 C11orf1Q9H5F2 150 aa11.36□□□□□ -0.59
PDZRN3-210ENST00000492909 TRAV40A0A0B4J280 105 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 J3QLI3 93 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 NPFFO15130 113 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 PVALBP20472 110 aaPredicted RBP11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 MALSU1Q96EH3 234 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
PDZRN3-210ENST00000492909 IGHV1-69DA0A0B4J2H0 117 aa11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 TIMM23O14925 209 aa11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 IGHV1-69P01742 117 aa11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-210ENST00000492909 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 C9JQL5 133 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 AGPAT2O15120 278 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 RBMXL2O75526 392 aaKnown RBP11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 TSPAN15O95858 294 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 CD1BP29016 333 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 SNCAP37840 140 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 RAB5CP51148 216 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 ID3Q02535 119 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 HABP2Q14520 560 aaPredicted RBP11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 CACFD1Q9UGQ2 172 aa11.33□□□□□ -0.59
PDZRN3-210ENST00000492909 FLNAP21333 2647 aaKnown RBP11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 ABCA1O95477 2261 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 NXPH3O95157 252 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 LGALS7P47929 136 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 NHLH2Q02577 135 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 CYB5R2Q6BCY4 276 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 CFHR4Q92496 578 aa11.33□□□□□ -0.6
PDZRN3-210ENST00000492909 IGHV3OR16-10A0A075B7F0 116 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 FAM90A26D6RGX4 464 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 WRBO00258 174 aa11.32□□□□□ -0.6
PDZRN3-210ENST00000492909 VENTXO95231 258 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms