RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 RFNGQ9Y644 331 aa7.4□□□□□ -1.22
SMARCC1-208ENST00000492896 KPTNQ9Y664 436 aa7.4□□□□□ -1.22
SMARCC1-208ENST00000492896 TNCP24821 2201 aa7.4□□□□□ -1.23
SMARCC1-208ENST00000492896 IGHV3-72A0A0B4J1Y9 119 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 IGHV2-70DA0A0C4DH43 119 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 TEX50A0A1B0GTY4 177 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 ODF3BA8MYP8 253 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 FOXH1O75593 365 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 IGLV2-23P01705 113 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 COX6B1P14854 86 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 HTR1DP28221 377 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 CEACAM3P40198 252 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 LGALS7P47929 136 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 FHITP49789 147 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 RPL8P62917 257 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 DLK1P80370 383 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 KLRD1Q13241 179 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 C1orf122Q6ZSJ8 110 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 VMO1Q7Z5L0 202 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 LFNGQ8NES3 379 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 OR1L8Q8NGR8 309 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 NARS2Q96I59 477 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 COMMD5Q9GZQ3 224 aa7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-208ENST00000492896 DOPEY1Q5JWR5 2465 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 A0A1W2PN81 502 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 A0A1W2PPI3 338 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 BTBD17A6NE02 478 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 C17orf112F2Z3M2 114 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 NDUFS8O00217 210 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 RRHO14718 337 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 AGPAT2O15120 278 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 SLC25A17O43808 307 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 HBE1P02100 147 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 OPN1MWP04001 364 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 IFNA4P05014 189 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 OPN1MW2P0DN77 364 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 OPN1MW3P0DN78 364 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 ZFP36P26651 326 aaKnown RBP7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 CHRNA7P36544 502 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 RAB2AP61019 212 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 LMO4P61968 165 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 LCN2P80188 198 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 SERF2P84101 59 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 TMEM41BQ5BJD5 291 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 HCP5Q6MZN7 132 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 CLEC2AQ6UVW9 174 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 CENPVQ7Z7K6 275 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 ZNF709Q8N972 641 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 FAM168AQ92567 244 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 SIRPDQ9H106 197 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 UNKLQ9H9P5 680 aaKnown RBP7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 TREM1Q9NP99 234 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 DPM3Q9P2X0 92 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 WDR83OSQ9Y284 106 aa7.38□□□□□ -1.23
SMARCC1-208ENST00000492896 SMCO3A2RU48 225 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 PRSS46E5RG02 174 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 INS-IGF2F8WCM5 200 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 MPDU1O75352 247 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 CA2P00918 260 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 CD1BP29016 333 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 SNCAP37840 140 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 ELLP55199 621 aaPredicted RBP7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 ATP5J2P56134 94 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 ERHP84090 104 aaKnown RBP7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 PAX2Q02962 417 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 SRSF1Q07955 248 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 MINOS1Q5TGZ0 78 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 MRPL41Q8IXM3 137 aaKnown RBP7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 MMD2Q8IY49 270 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 C10orf105Q8TEF2 133 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 RNF5Q99942 180 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 TMEM231Q9H6L2 316 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 ZNF430Q9H8G1 570 aaPredicted RBP7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 TPSG1Q9NRR2 321 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 NDUFA4L2Q9NRX3 87 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 MINOS1-NBL1R4GNA1 71 aa7.37□□□□□ -1.23
SMARCC1-208ENST00000492896 A0A1B0GV50 99 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 A1L4Q6 167 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 OOSP1A8MZH6 123 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 FNDC10F2Z333 226 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 RNASEK-C17orf49H0YIS7 233 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 TIMM23O14925 209 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 SOX15O60248 233 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 TOX4O94842 621 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 MBP02144 154 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 CRYGBP07316 175 aa7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 RNASE2P10153 161 aaKnown RBP7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 MDKP21741 143 aaPredicted RBP7.36□□□□□ -1.23
SMARCC1-208ENST00000492896 MAS1LP35410 378 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms