RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 U3KQ87 197 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 A0A0U1RQK1 487 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 BTBD17A6NE02 478 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 SLC25A17O43808 307 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 IFNA17P01571 189 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 F2RL1P55085 397 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 S100A10P60903 97 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 RPL15P61313 204 aaKnown RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 CXorf66Q5JRM2 361 aaPredicted RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 ZNF562Q6V9R5 426 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 SSX9Q7RTT3 188 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 STX12Q86Y82 276 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 OR2C3Q8N628 320 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 SSMEM1Q8WWF3 244 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 RBM14Q96PK6 669 aaKnown RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 QTRT1Q9BXR0 403 aaKnown RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 ENY2Q9NPA8 101 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 NDUFA4L2Q9NRX3 87 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 PLSCR3Q9NRY6 295 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
USP54-214ENST00000492357 MOB4Q9Y3A3 225 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 OR51B2Q9Y5P1 312 aa7.72□□□□□ -1.17
USP54-214ENST00000492357 ASH1LQ9NR48 2969 aaKnown RBP7.71□□□□□ -1.17
USP54-214ENST00000492357 FXYD6-FXYD2A0A087WZ82 144 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 IGHV3-72A0A0B4J1Y9 119 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 A0A1W2PRD5 423 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 A0A1W2PRF3 423 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 A0A1W2PRM7 423 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 A6NDX4 124 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 FNDC10F2Z333 226 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 H0YIZ8 118 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 CYB5BO43169 146 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 CHST1O43916 411 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 SCGB1D2O95969 90 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 HTR2BP41595 481 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 RPL27AP46776 148 aaKnown RBP7.71□□□□□ -1.18
USP54-214ENST00000492357 EIF2B2P49770 351 aaKnown RBP7.71□□□□□ -1.18
USP54-214ENST00000492357 SUB1P53999 127 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP54-214ENST00000492357 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP54-214ENST00000492357 HBG1P69891 147 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 HBG2P69892 147 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 LRRC37A5PQ49AS3 106 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 BRD3OSQ6XYD6 125 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 Q6YL49 198 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 PDZD9Q8IXQ8 264 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 CIARTQ8N365 385 aaPredicted RBP7.71□□□□□ -1.18
USP54-214ENST00000492357 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 ZNF114Q8NC26 417 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 DCUN1D4Q92564 292 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 SSX3Q99909 188 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 GGACTQ9BVM4 153 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 MFFQ9GZY8 342 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 ZNF430Q9H8G1 570 aaPredicted RBP7.71□□□□□ -1.18
USP54-214ENST00000492357 PLEKHA3Q9HB20 300 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 CDC42EP3Q9UKI2 254 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 LSM5Q9Y4Y9 91 aaKnown RBP7.71□□□□□ -1.18
USP54-214ENST00000492357 ABCA1O95477 2261 aa7.71□□□□□ -1.18
USP54-214ENST00000492357 TEX50A0A1B0GTY4 177 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 RNF222A6NCQ9 220 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 CEBPZOSA8MTT3 80 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 CORTO00230 105 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 SMAD7O15105 426 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 ARPC5O15511 151 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 KCNAB3O43448 404 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 SSSCA1O60232 199 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 SOX15O60248 233 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 RPL12P30050 165 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 S100A11P31949 105 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 VDAC2P45880 294 aaPredicted RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 IER3P46695 156 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 SULT1A1P50225 295 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 CRIP2P52943 208 aaPredicted RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 AP2S1P53680 142 aaPredicted RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 OR2B8PP59922 312 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 RAB11AP62491 216 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 ERHP84090 104 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 PRB3Q04118 309 aaPredicted RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 PLGLAQ15195 96 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 ATP6V1FQ16864 119 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 BSXQ3C1V8 233 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 FAM120AOSQ5T036 256 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 TMEM14EPQ6UXP3 125 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 VKORC1L1Q8N0U8 176 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 C9orf62Q8N4C0 152 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 OR11H4Q8NGC9 324 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 PIFOQ8TCI5 191 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 PINX1Q96BK5 328 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 RBKSQ9H477 322 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 OR5AC2Q9NZP5 309 aa7.7□□□□□ -1.18
USP54-214ENST00000492357 STRAPQ9Y3F4 350 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 FLNAP21333 2647 aaKnown RBP7.7□□□□□ -1.18
USP54-214ENST00000492357 TRAV3A0A0B4J244 114 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms