RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
TOM1-215ENST00000491987 DHFRP00374 187 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 HLA-AP01891 365 aaKnown RBP11.41□□□□□ -0.58
TOM1-215ENST00000491987 CTRB1P17538 263 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 ELK1P19419 428 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 OR2B8PP59922 312 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 LYSMD2Q8IV50 215 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 Q8N1Y9 231 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 CMTM3Q96MX0 182 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 COMMD9Q9P000 198 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 PEMTQ9UBM1 199 aa11.41□□□□□ -0.58
TOM1-215ENST00000491987 GABARAPO95166 117 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 DEFA4P12838 97 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 F2RP25116 425 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 RORCP51449 518 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 SCPEP1Q9HB40 452 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 SIGLEC8Q9NYZ4 499 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 DMRT1Q9Y5R6 373 aa11.4□□□□□ -0.58
TOM1-215ENST00000491987 SORL1Q92673 2214 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 IGLC7A0M8Q6 106 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 IZUMO1RA6ND01 250 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 MARCH11A6NNE9 402 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 FAM25AB3EWG3 89 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 FAM25CB3EWG5 89 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 FAM25GB3EWG6 89 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 GPR31O00270 319 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 GGCTO75223 188 aaKnown RBP11.39□□□□□ -0.59
TOM1-215ENST00000491987 IGHV4-30-4P0DP06 118 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
TOM1-215ENST00000491987 RCVRNP35243 200 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 LPAR6P43657 344 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 ERVK-16P61578 105 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 TSPAN5P62079 268 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 CTF1Q16619 201 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 RNASE12Q5GAN4 147 aaKnown RBP11.39□□□□□ -0.59
TOM1-215ENST00000491987 FAM209BQ5JX69 171 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 CLEC19AQ6UXS0 136 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 SGPP2Q8IWX5 399 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 CMTM1Q8IZ96 169 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 Q8N402 240 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 EEF1AKMT3Q96AZ1 226 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
TOM1-215ENST00000491987 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
TOM1-215ENST00000491987 OR2C1O95371 312 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 EDN2P20800 178 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 ARL3P36405 182 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 KLK9Q2XQG4 91 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 ADAMTSL5Q6ZMM2 481 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 FCAMRQ8WWV6 532 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 AP3S1Q92572 193 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 RCHY1Q96PM5 261 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 QTRT1Q9BXR0 403 aaKnown RBP11.38□□□□□ -0.59
TOM1-215ENST00000491987 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
TOM1-215ENST00000491987 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 MFSD2BA6NFX1 497 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 KRASP01116 189 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 ZNF182P17025 639 aaPredicted RBP11.37□□□□□ -0.59
TOM1-215ENST00000491987 G6PCP35575 357 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
TOM1-215ENST00000491987 ZNF585BQ52M93 769 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 DYNLRB2Q8TF09 96 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 SRSF8Q9BRL6 282 aaKnown RBP11.37□□□□□ -0.59
TOM1-215ENST00000491987 THAP7Q9BT49 309 aaPredicted RBP11.37□□□□□ -0.59
TOM1-215ENST00000491987 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 EXTL2Q9UBQ6 330 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
TOM1-215ENST00000491987 HUWE1Q7Z6Z7 4374 aaKnown RBP11.37□□□□□ -0.59
TOM1-215ENST00000491987 C2orf70A6NJV1 201 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 M0QYG6 137 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 FGF2P09038 288 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 TRAPPC2P0DI81 140 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 TRAPPC2BP0DI82 140 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 CD300EQ496F6 205 aaPredicted RBP11.36□□□□□ -0.59
TOM1-215ENST00000491987 LPCAT3Q6P1A2 487 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 TBC1D26Q86UD7 250 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 MRPS26Q9BYN8 205 aaKnown RBP11.36□□□□□ -0.59
TOM1-215ENST00000491987 ZMAT4Q9H898 229 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 ZC4H2Q9NQZ6 224 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
TOM1-215ENST00000491987 KMT2CQ8NEZ4 4911 aaKnown RBP11.36□□□□□ -0.59
TOM1-215ENST00000491987 LGALS9O00182 355 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 SNAPC5O75971 98 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 FOLR2P14207 255 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 S100GP29377 79 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
TOM1-215ENST00000491987 THOC7Q6I9Y2 204 aaKnown RBP11.35□□□□□ -0.59
TOM1-215ENST00000491987 GPR141Q7Z602 305 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms