RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.4
APOBEC3F-204ENST00000491387 TRAV3A0A0B4J244 114 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 METTL21EPA6NDL7 271 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 A8MWP6 167 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 GGCTO75223 188 aaKnown RBP6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 HLA-DQB1P01920 261 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 DTYMKP23919 212 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 GNG2P59768 71 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 CDK10Q15131 360 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 KCTD9Q7L273 389 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 SSX9Q7RTT3 188 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 MMD2Q8IY49 270 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 ZNF645Q8N7E2 425 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 DYNLRB2Q8TF09 96 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 OVOL2Q9BRP0 275 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 ANXA10Q9UJ72 324 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 ZNF257Q9Y2Q1 563 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 RBMX2Q9Y388 322 aaKnown RBP6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 DNAH10Q8IVF4 4471 aa6.33□□□□□ -1.4
APOBEC3F-204ENST00000491387 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 NPIPB5A8MRT5 1133 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TEX22C9J3V5 150 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 PPP5D1E7EU14 171 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 MPPED1O15442 326 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 HLA-AP01891 365 aaKnown RBP6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 REG1AP05451 166 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 CRYGCP07315 174 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 C8orf88P0DMB2 117 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 RPA2P15927 270 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 CBLN1P23435 193 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 FXYD4P59646 89 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 C15orf32Q32M92 178 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TPRA1Q86W33 373 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TMEM61Q8N0U2 210 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 SECTM1Q8WVN6 248 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TCTEX1D2Q8WW35 142 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 AP3S1Q92572 193 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 GGTLC1Q9BX51 225 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 WFDC10AQ9H1F0 79 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 OR2W1Q9Y3N9 320 aa6.32□□□□□ -1.4
APOBEC3F-204ENST00000491387 HERC2O95714 4834 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 TMEM213A2RRL7 107 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 NUPR2A6NF83 97 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 CTDSP2O14595 271 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 OR2J3O76001 311 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 SLC22A5O76082 557 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 ACTL6BO94805 426 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 OR2C1O95371 312 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 EIF4EP06730 217 aaKnown RBP6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 IL6RP08887 468 aaPredicted RBP6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 AREGP15514 252 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 PSMB6P28072 239 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 FCGR2CP31995 323 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 MAS1LP35410 378 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 ETV6P41212 452 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 PPP5CP53041 499 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 TNFRSF9Q07011 255 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 GUCA2BQ16661 112 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 ANKRD55Q3KP44 614 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 ZNF57Q68EA5 555 aaPredicted RBP6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 CNIH2Q6PI25 160 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 Q6ZWC4 215 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 CCDC190Q86UF4 302 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 BEST4Q8NFU0 473 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 TMEM167AQ8TBQ9 72 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 CACNG8Q8WXS5 425 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 MARC2Q969Z3 335 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 FANCD2OSQ96PS1 177 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 FXYD6Q9H0Q3 95 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 AUNIPQ9H7T9 357 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 SLC2A9Q9NRM0 540 aa6.31□□□□□ -1.4
APOBEC3F-204ENST00000491387 AGRNO00468 2067 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 SULT1C2O00338 296 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 RGS5O15539 181 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 KBTBD11O94819 623 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 NDUFB8O95169 186 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 PPYP01298 95 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 ZNF735P0CB33 412 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 TNFSF8P32971 234 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 ELLP55199 621 aaPredicted RBP6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 ARL6IP1Q15041 203 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 FAM106AQ4KMX7 169 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 RNASE12Q5GAN4 147 aaKnown RBP6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 OR4A47Q6IF82 309 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 MZT2AQ6P582 158 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 CEMP1Q6PRD7 247 aaPredicted RBP6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 ZNF818PQ6ZRF7 136 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
APOBEC3F-204ENST00000491387 HOGA1Q86XE5 327 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms