RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 LINC00322Q6ZN03 302 aaPredicted RBP10.29□□□□□ -0.76
COL6A3-211ENST00000491233 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 WDR89Q96FK6 387 aaPredicted RBP10.29□□□□□ -0.76
COL6A3-211ENST00000491233 FAM110AQ9BQ89 295 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 AUNIPQ9H7T9 357 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 HRASLSQ9HDD0 168 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 ZC4H2Q9NQZ6 224 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 IGLV11-55A0A075B6I3 123 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 SULT1C2O00338 296 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL6A3-211ENST00000491233 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
COL6A3-211ENST00000491233 TMEM17Q86X19 198 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 GPHB5Q86YW7 130 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 ZBTB34Q8NCN2 500 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 OR4A5Q8NH83 315 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 HIPK2Q9H2X6 1198 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 SRD5A3Q9H8P0 318 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 DIABLOQ9NR28 239 aa10.28□□□□□ -0.76
COL6A3-211ENST00000491233 TECRQ9NZ01 308 aaKnown RBP10.28□□□□□ -0.76
COL6A3-211ENST00000491233 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 MFSD2BA6NFX1 497 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 A8MWP6 167 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 DEFA4P12838 97 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 CBLN1P23435 193 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 TAS2R31P59538 309 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 OR2B8PP59922 312 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 KLK9Q2XQG4 91 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 OR51H1Q8NH63 302 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 AIFM2Q9BRQ8 373 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
COL6A3-211ENST00000491233 IGLC7A0M8Q6 106 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF320A2RRD8 509 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
COL6A3-211ENST00000491233 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
COL6A3-211ENST00000491233 OR11H12B2RN74 326 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 S1PR2O95136 353 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 HPRT1P00492 218 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
COL6A3-211ENST00000491233 NQO2P16083 231 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 CBX5P45973 191 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 HERV-K104P61576 105 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 POU2AF1Q16633 256 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 FAM106AQ4KMX7 169 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 AADACL3Q5VUY0 350 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 OR5AP2Q8NGF4 316 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 COMMD5Q9GZQ3 224 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 IFT46Q9NQC8 304 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM140Q9NV12 185 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 MLXQ9UH92 298 aa10.26□□□□□ -0.77
COL6A3-211ENST00000491233 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 UPK2O00526 184 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 RPA2P15927 270 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 GPR183P32249 361 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 TGFBR1P36897 503 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF57Q68EA5 555 aaPredicted RBP10.25□□□□□ -0.77
COL6A3-211ENST00000491233 BTNL8Q6UX41 500 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 DMBX1Q8NFW5 382 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 CXorf58Q96LI9 332 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 EHFQ9NZC4 300 aa10.25□□□□□ -0.77
COL6A3-211ENST00000491233 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM127O75204 238 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 SCAF4O95104 1147 aaKnown RBP10.24□□□□□ -0.77
COL6A3-211ENST00000491233 UNQ9165/PRO28630Q6UXU0 137 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 SLC16A13Q7RTY0 426 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 UXS1Q8NBZ7 420 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF502Q8TBZ5 544 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 QTRT1Q9BXR0 403 aaKnown RBP10.24□□□□□ -0.77
COL6A3-211ENST00000491233 PLEKHA2Q9HB19 425 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 COMMD9Q9P000 198 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 LYSTQ99698 3801 aa10.24□□□□□ -0.77
COL6A3-211ENST00000491233 IGHV3-35A0A0C4DH35 117 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 XRCC3O43542 346 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 RLN1P04808 185 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 CLEC3BP05452 202 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 GNRHRP30968 328 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 ERVK-16P61578 105 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 TM4SF20Q53R12 229 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 UBE2NLQ5JXB2 153 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 THOC7Q6I9Y2 204 aaKnown RBP10.23□□□□□ -0.77
COL6A3-211ENST00000491233 OR10W1Q8NGF6 305 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 OR52B4Q8NGK2 314 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 CD300LFQ8TDQ1 290 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 BORCS5Q969J3 196 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 MOB3AQ96BX8 217 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 SRSF8Q9BRL6 282 aaKnown RBP10.23□□□□□ -0.77
COL6A3-211ENST00000491233 FXYD6Q9H0Q3 95 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
COL6A3-211ENST00000491233 DNAH1Q9P2D7 4330 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 MARCH11A6NNE9 402 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 FGF2P09038 288 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 TAS2R20P59543 309 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM69Q5SWH9 247 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms