RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 SMIM8Q96KF7 97 aa11.21□□□□□ -0.62
SMPD4-219ENST00000491128 SLC25A32Q9H2D1 315 aa11.21□□□□□ -0.62
SMPD4-219ENST00000491128 UPK2O00526 184 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 RRHO14718 337 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 FOXH1O75593 365 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 IFNA10P01566 189 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-219ENST00000491128 FHITP49789 147 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 SULT1A1P50225 295 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 F2RL1P55085 397 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 HES1Q14469 280 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 STX12Q86Y82 276 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 KPTNQ9Y664 436 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 TEX50A0A1B0GTY4 177 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 ODF3BA8MYP8 253 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 LGALS4P56470 323 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 RAB14P61106 215 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 GNB1P62873 340 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 PDPNQ86YL7 162 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-219ENST00000491128 ZNF430Q9H8G1 570 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-219ENST00000491128 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-219ENST00000491128 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SMPD4-219ENST00000491128 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 A8MXK9 166 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMPD4-219ENST00000491128 KBTBD11O94819 623 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 IGKV1-33P01594 117 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 FAM90A26D6RGX4 464 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 FCN1O00602 326 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 TAAR5O14804 337 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 JTBO76095 146 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 REG1AP05451 166 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 SPCS3P61009 180 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-219ENST00000491128 FAM122CQ6P4D5 195 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 OR1S2Q8NGQ3 325 aa11.19□□□□□ -0.62
SMPD4-219ENST00000491128 CREBBPQ92793 2442 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 A0A1B0GV50 99 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 NDUFS8O00217 210 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 MED6O75586 246 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 SAA4P35542 130 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 HSPE1P61604 102 aaKnown RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 CTAG1AP78358 180 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 PUSL1Q8N0Z8 303 aaKnown RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 RSG1Q9BU20 258 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 NAV3Q8IVL0 2385 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 A0A1B0GW64 132 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 C15orf62A8K5M9 175 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 IL6RP08887 468 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 USF1P22415 310 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 MC5RP33032 325 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 RPL8P62917 257 aaKnown RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
SMPD4-219ENST00000491128 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-219ENST00000491128 CENPVL3A0A0U1RRI6 287 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 VENTXO95231 258 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 AVPP01185 164 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 RRASP10301 218 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 DEFB113Q30KQ7 82 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 SLC25A24Q6NUK1 477 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 UBAC2Q8NBM4 344 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 TSPAN4O14817 238 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
SMPD4-219ENST00000491128 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 ATP6V0CP27449 155 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 MMDQ15546 238 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 MLANAQ16655 118 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 TMEM182Q6ZP80 229 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-219ENST00000491128 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 THNSL2Q86YJ6 484 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 CFHR4Q92496 578 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
SMPD4-219ENST00000491128 METTL1Q9UBP6 276 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms