RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MLLT11Q13015 90 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-208ENST00000491075 LAMTOR1Q6IAA8 161 aa15.27■□□□□ 0.04
CLIP2-208ENST00000491075 GALNT14Q96FL9 552 aa15.27■□□□□ 0.04
CLIP2-208ENST00000491075 ZNF436Q9C0F3 470 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-208ENST00000491075 ACOT13Q9NPJ3 140 aa15.27■□□□□ 0.04
CLIP2-208ENST00000491075 SPATA2Q9UM82 520 aa15.27■□□□□ 0.04
CLIP2-208ENST00000491075 KIAA1109Q2LD37 5005 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 IGKV1D-13A0A0B4J2D9 117 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 IGHV3-35A0A0C4DH35 117 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 IGKV1-13P0DP09 117 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 EIF4EBP1Q13541 118 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-208ENST00000491075 SSX9Q7RTT3 188 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 OR4A5Q8NH83 315 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 TMEM190Q8WZ59 177 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 DAZ1Q9NQZ3 744 aaKnown RBP15.26■□□□□ 0.03
CLIP2-208ENST00000491075 THYN1Q9P016 225 aa15.26■□□□□ 0.03
CLIP2-208ENST00000491075 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 CGB1A6NKQ9 187 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 IFITM5A6NNB3 132 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 PDCD5O14737 125 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 RPL35AP18077 110 aaKnown RBP15.25■□□□□ 0.03
CLIP2-208ENST00000491075 BRWD1-AS2P59051 145 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 OGFRL1Q5TC84 451 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-208ENST00000491075 ZNF66Q6ZN08 573 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 GATAD1Q8WUU5 269 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 AIFM2Q9BRQ8 373 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 MFFQ9GZY8 342 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 MAP6D1Q9H9H5 199 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 BET1LQ9NYM9 111 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 TAS2R8Q9NYW2 309 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 ELF5Q9UKW6 265 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-208ENST00000491075 DNAH6Q9C0G6 4158 aa15.25■□□□□ 0.03
CLIP2-208ENST00000491075 TGOLN2O43493 480 aa15.24■□□□□ 0.03
CLIP2-208ENST00000491075 PTBP1P26599 531 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLIP2-208ENST00000491075 RCN1Q15293 331 aa15.24■□□□□ 0.03
CLIP2-208ENST00000491075 TIMM50Q3ZCQ8 353 aa15.24■□□□□ 0.03
CLIP2-208ENST00000491075 MFSD4AQ8N468 514 aa15.24■□□□□ 0.03
CLIP2-208ENST00000491075 C6orf62Q9GZU0 229 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-208ENST00000491075 DCSTAMPQ9H295 470 aa15.24■□□□□ 0.03
CLIP2-208ENST00000491075 IGLC7A0M8Q6 106 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 S1PR2O95136 353 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 FCGR2BP31994 310 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-208ENST00000491075 OR10A3P58181 314 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 OR2B8PP59922 312 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 CNIH2Q6PI25 160 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 SRSF8Q9BRL6 282 aaKnown RBP15.23■□□□□ 0.03
CLIP2-208ENST00000491075 ATG5Q9H1Y0 275 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 VCXQ9H320 206 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 HRASLSQ9HDD0 168 aa15.23■□□□□ 0.03
CLIP2-208ENST00000491075 TRAV1-2A0A0B4J238 106 aa15.22■□□□□ 0.03
CLIP2-208ENST00000491075 CYB5BO43169 146 aa15.22■□□□□ 0.03
CLIP2-208ENST00000491075 VN1R17PQ8TDU5 208 aa15.22■□□□□ 0.03
CLIP2-208ENST00000491075 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
CLIP2-208ENST00000491075 CASQ2O14958 399 aaPredicted RBP15.21■□□□□ 0.03
CLIP2-208ENST00000491075 IFNA4P05014 189 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 TCTAP57738 103 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 RBMS2Q15434 407 aaKnown RBP15.21■□□□□ 0.03
CLIP2-208ENST00000491075 CDNFQ49AH0 187 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 HACD4Q5VWC8 232 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 OR5B3Q8NH48 314 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 C11orf45Q8TAV5 145 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 BSCL2Q96G97 398 aaPredicted RBP15.21■□□□□ 0.03
CLIP2-208ENST00000491075 MGLLQ99685 303 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 C11orf68Q9H3H3 251 aaKnown RBP15.21■□□□□ 0.03
CLIP2-208ENST00000491075 DUSP21Q9H596 190 aa15.21■□□□□ 0.03
CLIP2-208ENST00000491075 OR2T8A6NH00 312 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 NDUFA4O00483 81 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 RGS10O43665 173 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 MYL9P24844 172 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 SPSB3Q6PJ21 355 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 CD300LFQ8TDQ1 290 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 GPHA2Q96T91 129 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 RARRES2Q99969 163 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 COMMD5Q9GZQ3 224 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 FBXL17Q9UF56 701 aa15.2■□□□□ 0.02
CLIP2-208ENST00000491075 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 RBFOX2O43251 390 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLIP2-208ENST00000491075 FGF2P09038 288 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 RPA2P15927 270 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 RAB3BP20337 219 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 NANOS2P60321 138 aaKnown RBP15.19■□□□□ 0.02
CLIP2-208ENST00000491075 PRR20EP86478 221 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 PRR20CP86479 221 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 PRR20DP86480 221 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 PRR20BP86481 221 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 PRR20AP86496 221 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 MSMO1Q15800 293 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 GDPD1Q8N9F7 314 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 NUDCD2Q8WVJ2 157 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 ATP6V0BQ99437 205 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 CSTL1Q9H114 145 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 ANXA10Q9UJ72 324 aa15.19■□□□□ 0.02
CLIP2-208ENST00000491075 RYR1P21817 5038 aa15.18■□□□□ 0.02
CLIP2-208ENST00000491075 K7EMT4 169 aa15.18■□□□□ 0.02
CLIP2-208ENST00000491075 EBAG9O00559 213 aa15.18■□□□□ 0.02
CLIP2-208ENST00000491075 CTSDP07339 412 aaPredicted RBP15.18■□□□□ 0.02
CLIP2-208ENST00000491075 TAS2R31P59538 309 aa15.18■□□□□ 0.02
CLIP2-208ENST00000491075 POU2AF1Q16633 256 aa15.18■□□□□ 0.02
CLIP2-208ENST00000491075 THOC7Q6I9Y2 204 aaKnown RBP15.18■□□□□ 0.02
CLIP2-208ENST00000491075 APRG1Q8IVJ8 170 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms