RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 H3BUA1 57 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 FBXO24O75426 580 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 SFT2D2O95562 160 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 IGLV1-40P01703 118 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 AKR1C2P52895 323 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 CD83Q01151 205 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 LGI3Q8N145 548 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 DUSP18Q8NEJ0 188 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 RRNAD1Q96FB5 475 aaKnown RBP12.43□□□□□ -0.42
TRA2A-208ENST00000490942 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 C20orf85Q9H1P6 137 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 FOXA2Q9Y261 457 aaPredicted RBP12.43□□□□□ -0.42
TRA2A-208ENST00000490942 ZNF257Q9Y2Q1 563 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 FBXO7Q9Y3I1 522 aa12.43□□□□□ -0.42
TRA2A-208ENST00000490942 A0A0B4J2A0 478 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 C15orf61A6NNL5 157 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 OPN1MWP04001 364 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 RPL27AP46776 148 aaKnown RBP12.42□□□□□ -0.42
TRA2A-208ENST00000490942 KRTAP10-3P60369 221 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 GNB1P62873 340 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 SELENOHQ8IZQ5 122 aaKnown RBP12.42□□□□□ -0.42
TRA2A-208ENST00000490942 GRPEL2Q8TAA5 225 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 ZFP57Q9NU63 452 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 TMEM14BQ9NUH8 114 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 SHPKQ9UHJ6 478 aa12.42□□□□□ -0.42
TRA2A-208ENST00000490942 PLXNB1O43157 2135 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 G3V318 75 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 IGKV1-5P01602 117 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 VAMP1P23763 118 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 PSMB8P28062 276 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 RAB25P57735 213 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 OR2B8PP59922 312 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 PPP1R1AQ13522 171 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 UNQ5815/PRO19632Q6UWF5 114 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 LFNGQ8NES3 379 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 ENKURQ8TC29 256 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 SLA2Q9H6Q3 261 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 WSB1Q9Y6I7 421 aa12.41□□□□□ -0.42
TRA2A-208ENST00000490942 TRAV3A0A0B4J244 114 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 C9orf170A2RU37 121 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 DUS4LO95620 317 aaKnown RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 OR4E1P0C645 316 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 OR9G9P0C7N8 305 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 LYG2Q86SG7 212 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 ZNF329Q86UD4 541 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 TTC9CQ8N5M4 171 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 OR1L8Q8NGR8 309 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 PHB2Q99623 299 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 FAM103A1Q9BTL3 118 aaKnown RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 NUDT15Q9NV35 164 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
TRA2A-208ENST00000490942 TSSC4Q9Y5U2 329 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-208ENST00000490942 TENM1Q9UKZ4 2725 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 NPIPB5A8MRT5 1133 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 TEX22C9J3V5 150 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
TRA2A-208ENST00000490942 DHRS2Q13268 280 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 KLK9Q2XQG4 91 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 ASPHD1Q5U4P2 390 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
TRA2A-208ENST00000490942 FAM110DQ8TAY7 271 aaPredicted RBP12.39□□□□□ -0.43
TRA2A-208ENST00000490942 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 KLK9Q9UKQ9 250 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
TRA2A-208ENST00000490942 A0A0B4J293 547 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 A0A1W2PN81 502 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 INS-IGF2F8WCM5 200 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 CRYGCP07315 174 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 H2AFB2P0C5Z0 115 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 TRAPPC2P0DI81 140 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 TRAPPC2BP0DI82 140 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 CD28P10747 220 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 SLC25A6P12236 298 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 ANXA7P20073 488 aaKnown RBP12.38□□□□□ -0.43
TRA2A-208ENST00000490942 CHRNA7P36544 502 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 374.5 ms