RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SLC25A40Q8TBP6 338 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 RAB2BQ8WUD1 216 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 PLEKHB2Q96CS7 222 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 CCDC115Q96NT0 180 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 VPS25Q9BRG1 176 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 SEC22CQ9BRL7 303 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TPT1P8Q9HAU6 139 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TMEM38BQ9NVV0 291 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 FBXL12Q9NXK8 326 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TVP23BQ9NYZ1 205 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 COPZ2Q9P299 210 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 ROCK2O75116 1388 aaKnown RBP2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 ROBO3Q96MS0 1386 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TRBV20OR9-2A0A075B6H5 130 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 BORCS7-ASMTA0A0B4J1R7 106 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 CLDN25C9JDP6 229 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 LST1O00453 97 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR2J2O76002 312 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 FAM107AO95990 144 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGLV3-25P01717 112 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 DBIP07108 87 aaKnown RBP2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 GPX2P18283 190 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 SERPINB10P48595 397 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 DAPP51397 102 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 CMC4P56277 68 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 TBPL1P62380 186 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 PDGFRLQ15198 375 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 WHAMMP3Q1A5X7 153 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 CROCCP2Q86T23 111 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 LRRC18Q8N456 261 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR13C8Q8NGS7 320 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 THEM6Q8WUY1 208 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR5P3Q8WZ94 311 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 WDR61Q9GZS3 305 aaKnown RBP2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 TMEM126AQ9H061 195 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 LAMTOR3Q9UHA4 124 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 CYSLTR1Q9Y271 337 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 S4R3C0 116 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMARCA2P51531 1590 aa2.6□□□□□ -1.99
HMGB1P38-201ENST00000490557 CEP152O94986 1710 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 WDR7Q9Y4E6 1490 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 TRBV19A0A075B6N1 114 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 TRAV9-1A0A075B6T8 112 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 A0A0J9YY10 115 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 A0A1B0GX78 115 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR5H14A6NHG9 310 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF98A6NK75 572 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 A8MUN3 132 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 J3KT08 172 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 J3QRK9 145 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 K7ERS5 55 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 CSN2P05814 226 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF705DP0CH99 300 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMIM10L2AP0DMW4 78 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMIM10L2BP0DMW5 78 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 RPS4Y1P22090 263 aaKnown RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 OPRM1P35372 400 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 ATP5G3P48201 142 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 HBA1P69905 142 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 HTR4Q13639 388 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 LTC4SQ16873 150 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 TNFAIP8L3Q5GJ75 292 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 WDR59Q6PJI9 974 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 Q6Q795 121 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 AGTRAPQ6RW13 159 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 UNQ9165/PRO28630Q6UXU0 137 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SCXQ7RTU7 201 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF664Q8N3J9 261 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 MRPL30Q8TCC3 161 aaKnown RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SLC7A6Q92536 515 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SLC25A46Q96AG3 418 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 CMBLQ96DG6 245 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGF2BP2-AS1Q96M15 143 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 ERMAPQ96PL5 475 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 DOHHQ9BU89 302 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 C20orf27Q9GZN8 174 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 C11orf68Q9H3H3 251 aaKnown RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 C21orf62Q9NYP8 219 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 MRPS16Q9Y3D3 137 aaKnown RBP2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 MIA3Q5JRA6 1907 aa2.59□□□□□ -1.99
HMGB1P38-201ENST00000490557 SIGLEC1Q9BZZ2 1709 aa2.59□□□□□ -2
HMGB1P38-201ENST00000490557 TNS2Q63HR2 1409 aa2.59□□□□□ -2
HMGB1P38-201ENST00000490557 YEATS2Q9ULM3 1422 aa2.59□□□□□ -2
HMGB1P38-201ENST00000490557 HECW2Q9P2P5 1572 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 TRAV4A0A0B4J268 109 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 TMEM189A5PLL7 270 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 DPRXA6NFQ7 191 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 LINC00587B1AMM8 73 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 C5orf58C9J3I9 102 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 TRAPPC2LH3BP13 241 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 HLA-DQB1P01920 261 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 CD7P09564 240 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 ATP6V0CP27449 155 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 PIGPP57054 158 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
HMGB1P38-201ENST00000490557 BSPH1Q075Z2 132 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 ZNF616Q08AN1 781 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 DHRS2Q13268 280 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 OR8B8Q15620 311 aa2.58□□□□□ -2
HMGB1P38-201ENST00000490557 LYRM7Q5U5X0 104 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms