RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 EHFQ9NZC4 300 aa9.04□□□□□ -0.96
SEMA6C-208ENST00000489944 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
SEMA6C-208ENST00000489944 A8MWP6 167 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 UPK2O00526 184 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 DEFA4P12838 97 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 GNRHRP30968 328 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 ELLP55199 621 aaPredicted RBP9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 TAS2R20P59543 309 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 AADACL3Q5VUY0 350 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 MUC7Q8TAX7 377 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 VN1R17PQ8TDU5 208 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 AP3S1Q92572 193 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 ASCL2Q99929 193 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 QTRT1Q9BXR0 403 aaKnown RBP9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 RNF167Q9H6Y7 350 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 ZC4H2Q9NQZ6 224 aa9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
SEMA6C-208ENST00000489944 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 GPR31O00270 319 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 OR2J3O76001 311 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 IFNA6P05013 189 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 APELAP0DMC3 54 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 PTBP1P26599 531 aaKnown RBP eCLIP9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 UCP3P55916 312 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 FXYD4P59646 89 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 OR2B8PP59922 312 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 C10orf55Q5SWW7 151 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 MZT2AQ6P582 158 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 DMBX1Q8NFW5 382 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 OR1L8Q8NGR8 309 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 OR5B3Q8NH48 314 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 ZNF2Q9BSG1 426 aaPredicted RBP9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 DMRT1Q9Y5R6 373 aa9.02□□□□□ -0.97
SEMA6C-208ENST00000489944 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 HMX3A6NHT5 357 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 RBMXL2O75526 392 aaKnown RBP9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 PGLYRP1O75594 196 aaPredicted RBP9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 SNAPC5O75971 98 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TRAPPC2P0DI81 140 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TRAPPC2BP0DI82 140 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 MYOD1P15172 320 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TBPP20226 339 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 RCVRNP35243 200 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 ARL3P36405 182 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 DEFB114Q30KQ6 69 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TMEM17Q86X19 198 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 GDPD1Q8N9F7 314 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 GPX8Q8TED1 209 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 DGCR14Q96DF8 476 aaKnown RBP9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TMEM56Q96MV1 263 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
SEMA6C-208ENST00000489944 IGLC7A0M8Q6 106 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 TNFSF12O43508 249 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 PRH1P02810 166 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 SERPINE2P07093 398 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 FOLR2P14207 255 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 AREGP15514 252 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 RPA2P15927 270 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 RORCP51449 518 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 SSX9Q7RTT3 188 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 SLC16A13Q7RTY0 426 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 SLC38A6Q8IZM9 456 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 OR51H1Q8NH63 302 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
SEMA6C-208ENST00000489944 ISOC1Q96CN7 298 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 ZNF486Q96H40 463 aaPredicted RBP9□□□□□ -0.97
SEMA6C-208ENST00000489944 FUNDC2Q9BWH2 189 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 MRPL27Q9P0M9 148 aaKnown RBP9□□□□□ -0.97
SEMA6C-208ENST00000489944 UFC1Q9Y3C8 167 aa9□□□□□ -0.97
SEMA6C-208ENST00000489944 A0A1B0GW64 132 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 E7EUB6 86 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 B3GALNT1O75752 331 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 ATG12O94817 140 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 NDUFB8O95169 186 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 LYL1P12980 280 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 CBLN1P23435 193 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 RFX2P48378 723 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 TSPAN5P62079 268 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 LINC00322Q6ZN03 302 aaPredicted RBP8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 NDUFA4L2Q9NRX3 87 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 RABL2AQ9UBK7 228 aaPredicted RBP8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 RABL2BQ9UNT1 228 aa8.99□□□□□ -0.97
SEMA6C-208ENST00000489944 CGB1A6NKQ9 187 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms