RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 RNF183Q96D59 192 aa12.58□□□□□ -0.4
TOP3B-217ENST00000489581 CXorf58Q96LI9 332 aa12.58□□□□□ -0.4
TOP3B-217ENST00000489581 MGLLQ99685 303 aa12.58□□□□□ -0.4
TOP3B-217ENST00000489581 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.4
TOP3B-217ENST00000489581 UBE2CO00762 179 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 HRASP01112 189 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 CTXN2P0C2S0 81 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
TOP3B-217ENST00000489581 PLET1Q6UQ28 207 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 STPG3Q8N7X2 389 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 ZNF502Q8TBZ5 544 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 PHLDA1Q8WV24 401 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-217ENST00000489581 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-217ENST00000489581 VCXQ9H320 206 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 DUSP21Q9H596 190 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 C5orf66Q9H5L9 145 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 UFC1Q9Y3C8 167 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 HERC2O95714 4834 aa12.57□□□□□ -0.4
TOP3B-217ENST00000489581 TRAV1-2A0A0B4J238 106 aa12.56□□□□□ -0.4
TOP3B-217ENST00000489581 RPA2P15927 270 aa12.56□□□□□ -0.4
TOP3B-217ENST00000489581 HLA-GP17693 338 aa12.56□□□□□ -0.4
TOP3B-217ENST00000489581 ATF4P18848 351 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-217ENST00000489581 ELLP55199 621 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-217ENST00000489581 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
TOP3B-217ENST00000489581 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
TOP3B-217ENST00000489581 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 TSPAN4O14817 238 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 S1PR2O95136 353 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 RAB3BP20337 219 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 ARL6IP1Q15041 203 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 TIMM50Q3ZCQ8 353 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 HACD4Q5VWC8 232 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 ZNF66Q6ZN08 573 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 TMEM217Q8N7C4 229 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-217ENST00000489581 DCSTAMPQ9H295 470 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
TOP3B-217ENST00000489581 SMIM30A4D0T7 59 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 TMEM235A6NFC5 223 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 TNFSF12O43508 249 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 MYL9P24844 172 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 PTBP1P26599 531 aaKnown RBP eCLIP12.54□□□□□ -0.4
TOP3B-217ENST00000489581 OR2B8PP59922 312 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 SSX1Q16384 188 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
TOP3B-217ENST00000489581 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 IGLC7A0M8Q6 106 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 OR2T8A6NH00 312 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 TGOLN2O43493 480 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 FCGR2BP31994 310 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-217ENST00000489581 LAMTOR1Q6IAA8 161 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 PRSS48Q7RTY5 328 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 NR2C2APQ86WQ0 139 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 OR4A5Q8NH83 315 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 TMEM190Q8WZ59 177 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 CCL28Q9NRJ3 127 aa12.53□□□□□ -0.4
TOP3B-217ENST00000489581 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 GALNT14Q96FL9 552 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
TOP3B-217ENST00000489581 THYN1Q9P016 225 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 ANXA10Q9UJ72 324 aa12.52□□□□□ -0.41
TOP3B-217ENST00000489581 UPK2O00526 184 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
TOP3B-217ENST00000489581 SSX5O60225 188 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 PTHLHP12272 177 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 AQP4P55087 323 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 GNG2P59768 71 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 VN1R17PQ8TDU5 208 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 AIFM2Q9BRQ8 373 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
TOP3B-217ENST00000489581 IGHV3-21A0A0B4J1V1 117 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 OR4C46A6NHA9 309 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 SULT1C2O00338 296 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 CTSDP07339 412 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-217ENST00000489581 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
TOP3B-217ENST00000489581 C22orf42Q6IC83 251 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 SLC25A24Q6NUK1 477 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 FBXL17Q9UF56 701 aa12.5□□□□□ -0.41
TOP3B-217ENST00000489581 VPS13DQ5THJ4 4388 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 FCGR2CP31995 323 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 PRR20EP86478 221 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 PRR20CP86479 221 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 PRR20DP86480 221 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 PRR20BP86481 221 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 PRR20AP86496 221 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 ZNF124Q15973 351 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms