RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 FGF16O43320 207 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 NDUFA3O95167 84 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 C4BPBP20851 252 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 C5orf64Q2M2E5 130 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 C9orf152Q5JTZ5 239 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 NPFFR1Q9GZQ6 430 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 OR2A4O95047 310 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 SPDEFO95238 335 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 AMY1AP04745 511 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 HLA-GP17693 338 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 UBE2KP61086 200 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 GSG1LQ6UXU4 331 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLDN11-209ENST00000489485 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 PDCD10Q9BUL8 212 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 TPSG1Q9NRR2 321 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 GSKIPQ9P0R6 139 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
CLDN11-209ENST00000489485 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
CLDN11-209ENST00000489485 RBMXL2O75526 392 aaKnown RBP11.31□□□□□ -0.6
CLDN11-209ENST00000489485 P0C879 139 aa11.31□□□□□ -0.6
CLDN11-209ENST00000489485 IAH1Q2TAA2 248 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-209ENST00000489485 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
CLDN11-209ENST00000489485 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
CLDN11-209ENST00000489485 WDR89Q96FK6 387 aaPredicted RBP11.31□□□□□ -0.6
CLDN11-209ENST00000489485 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
CLDN11-209ENST00000489485 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-209ENST00000489485 KBTBD11O94819 623 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 NXPH3O95157 252 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 OR2B8PP59922 312 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-209ENST00000489485 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
CLDN11-209ENST00000489485 TEX45Q8NA69 505 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
CLDN11-209ENST00000489485 ZNF436Q9C0F3 470 aaPredicted RBP11.3□□□□□ -0.6
CLDN11-209ENST00000489485 FCN1O00602 326 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
CLDN11-209ENST00000489485 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
CLDN11-209ENST00000489485 Q6ZS46 218 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 A0A1B0GU03 582 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 ACTL6BO94805 426 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 IFNA7P01567 189 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 CRYGBP07316 175 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 GNB1P62873 340 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 RELBQ01201 579 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 SPIN2AQ99865 258 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 SPIN2BQ9BPZ2 258 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
CLDN11-209ENST00000489485 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.29□□□□□ -0.6
CLDN11-209ENST00000489485 U3KQ87 197 aa11.29□□□□□ -0.6
CLDN11-209ENST00000489485 UPK2O00526 184 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 TSC22D2O75157 780 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 CNIH1O95406 144 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 CA2P00918 260 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 OPN1MWP04001 364 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 MYOD1P15172 320 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
CLDN11-209ENST00000489485 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
CLDN11-209ENST00000489485 SCGB1D2O95969 90 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 SLC25A6P12236 298 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.6
CLDN11-209ENST00000489485 TNXAQ16473 311 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 PRSS8Q16651 343 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.6
CLDN11-209ENST00000489485 Q6ZSV7 163 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 MMD2Q8IY49 270 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 OR4A5Q8NH83 315 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 CITED4Q96RK1 184 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 COA4Q9NYJ1 87 aa11.27□□□□□ -0.6
CLDN11-209ENST00000489485 LINC00862A6NCI5 91 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 C15orf61A6NNL5 157 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 PITX3O75364 302 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 CX3CL1P78423 397 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 SLC35E3Q7Z769 313 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 NMES1Q9C002 83 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
CLDN11-209ENST00000489485 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
CLDN11-209ENST00000489485 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
CLDN11-209ENST00000489485 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
CLDN11-209ENST00000489485 IFNA17P01571 189 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms