RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 HLA-DRB3P79483 266 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 KIR3DS1Q14943 382 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 RNF212Q495C1 297 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 Q5VSD8 79 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 PLET1Q6UQ28 207 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 MOB1BQ7L9L4 216 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 MRPL48Q96GC5 212 aaKnown RBP6.55□□□□□ -1.36
SSBP1-212ENST00000489378 NEDD4LQ96PU5 975 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 FYTTD1Q96QD9 318 aaKnown RBP6.55□□□□□ -1.36
SSBP1-212ENST00000489378 RNF2Q99496 336 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 THTPAQ9BU02 230 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 RDH8Q9NYR8 311 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 ETV7Q9Y603 341 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 IGKV3-7A0A075B6H7 116 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 MRPS14O60783 128 aaKnown RBP6.54□□□□□ -1.36
SSBP1-212ENST00000489378 REG1AP05451 166 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 CRYGCP07315 174 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 RELQ04864 619 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-212ENST00000489378 CDK10Q15131 360 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 TBCEQ15813 527 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-212ENST00000489378 KLK9Q2XQG4 91 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 SPATA24Q86W54 205 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 C20orf24Q9BUV8 137 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 OR2D2Q9H210 308 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 SLC2A9Q9NRM0 540 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 IMPAD1Q9NX62 359 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 ERVK13-1Q9NX77 482 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 KLK9Q9UKQ9 250 aa6.54□□□□□ -1.36
SSBP1-212ENST00000489378 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 TRBV6-6A0A0A6YYG2 114 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 G3V2T6 193 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 L7N2F9 121 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 HOXB6P17509 224 aaKnown RBP6.53□□□□□ -1.36
SSBP1-212ENST00000489378 C4BPBP20851 252 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 HTR2CP28335 458 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 CMC4P56277 68 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-212ENST00000489378 RPS27AP62979 156 aaKnown RBP6.53□□□□□ -1.36
SSBP1-212ENST00000489378 OR10K2Q6IF99 312 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 LYPD1Q8N2G4 141 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 GBGT1Q8N5D6 347 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 SLC7A6OSQ96CW6 309 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-212ENST00000489378 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 GABARAPL3Q9BY60 117 aa6.53□□□□□ -1.36
SSBP1-212ENST00000489378 TRBV5-5A0A0J9YX44 114 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 A0A1W2PPK0 400 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 LINC00473A8K010 186 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 TGOLN2O43493 480 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 CREBL2O60519 120 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-212ENST00000489378 CD3GP09693 182 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 ZNF735P0CB33 412 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 RRASP10301 218 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 HIST1H1BP16401 226 aaKnown RBP6.52□□□□□ -1.37
SSBP1-212ENST00000489378 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
SSBP1-212ENST00000489378 OR2G6Q5TZ20 316 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 VKORC1L1Q8N0U8 176 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 OSR1Q8TAX0 266 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-212ENST00000489378 NICN1Q9BSH3 213 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 GABARAPL1Q9H0R8 117 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 Q9N2K0 584 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 CLEC5AQ9NY25 188 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 CKLFQ9UBR5 152 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 AK3Q9UIJ7 227 aa6.52□□□□□ -1.37
SSBP1-212ENST00000489378 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
SSBP1-212ENST00000489378 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 NBDYA0A0U1RRE5 68 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 TCRBV3S1A0A5B6 114 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 OR2T8A6NH00 312 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 CHEK1O14757 476 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 DHFRP00374 187 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 NPY1RP25929 384 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
SSBP1-212ENST00000489378 DEFB131AP59861 70 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 RPL22L1Q6P5R6 122 aaKnown RBP6.51□□□□□ -1.37
SSBP1-212ENST00000489378 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-212ENST00000489378 OR6M1Q8NGM8 313 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 TRUB1Q8WWH5 349 aaKnown RBP6.51□□□□□ -1.37
SSBP1-212ENST00000489378 KCNK15Q9H427 330 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 SMPXQ9UHP9 88 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 TBC1D24Q9ULP9 559 aa6.51□□□□□ -1.37
SSBP1-212ENST00000489378 TRBV5-7A0A0A0MS05 114 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 A0A0A6YYD4 124 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 K7EMT4 169 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 NDUFA4O00483 81 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 LIMS3P0CW19 117 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 LIMS4P0CW20 117 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 DEFA4P12838 97 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.376e-6■■□□□ 11.7
SSBP1-212ENST00000489378 PSMD7P51665 324 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 XGP55808 180 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 RPS11P62280 158 aaKnown RBP eCLIP6.5□□□□□ -1.37
SSBP1-212ENST00000489378 TPBGQ13641 420 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 IRF3Q14653 427 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 LIPKQ5VXJ0 399 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 MEDAGQ5VYS4 303 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 FAM90A2PQ658T7 463 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms