RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
C9orf3-220ENST00000489318 AANATQ16613 207 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 FBLN7Q53RD9 439 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 CYB5R2Q6BCY4 276 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 TMEM14EPQ6UXP3 125 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 C9orf139Q6ZV77 190 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 TMEM252Q8N6L7 170 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 OR8H1Q8NGG4 311 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 SLC25A31Q9H0C2 315 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-220ENST00000489318 TPSG1Q9NRR2 321 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 ITPR3Q14573 2671 aa9.19□□□□□ -0.94
C9orf3-220ENST00000489318 A0A0U1RQK1 487 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 KANTRA0A1W2PQU2 76 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 FAM24AA6NFZ4 105 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 RRHO14718 337 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 TAAR5O14804 337 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 RGS13O14921 159 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 KCNAB3O43448 404 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 IAPPP10997 89 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 PAX6P26367 422 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 CAV2P51636 162 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 KRTAP1-1Q07627 177 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 PRSS8Q16651 343 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 BRD3OSQ6XYD6 125 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 PPP1R27Q86WC6 154 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 CIARTQ8N365 385 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-220ENST00000489318 ARPC5LQ9BPX5 153 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 NDUFA4L2Q9NRX3 87 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 NUP50Q9UKX7 468 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 HECTD1Q9ULT8 2610 aa9.18□□□□□ -0.94
C9orf3-220ENST00000489318 TEX50A0A1B0GTY4 177 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 CGB1A6NKQ9 187 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 CEBPZOSA8MTT3 80 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 SCAF4O95104 1147 aaKnown RBP9.17□□□□□ -0.94
C9orf3-220ENST00000489318 IFNA17P01571 189 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 FBP1P09467 338 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 SULT1A1P50225 295 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-220ENST00000489318 SSBP2P81877 361 aaPredicted RBP9.17□□□□□ -0.94
C9orf3-220ENST00000489318 MMDQ15546 238 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 BSXQ3C1V8 233 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 SLC51BQ86UW2 128 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 STOML3Q8TAV4 291 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 OR4C12Q96R67 309 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 COMMD5Q9GZQ3 224 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 CYTL1Q9NRR1 136 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 PSENENQ9NZ42 101 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
C9orf3-220ENST00000489318 FBXL17Q9UF56 701 aa9.17□□□□□ -0.94
C9orf3-220ENST00000489318 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 A0A1B0GW64 132 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 PMS2P5A8MQ11 134 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 H3BP45 60 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 MYOD1P15172 320 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 TMEM11P17152 192 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-220ENST00000489318 COMPP49747 757 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-220ENST00000489318 F2RL1P55085 397 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 C5orf64Q2M2E5 130 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 TUSC1Q2TAM9 212 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 STX12Q86Y82 276 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 TEX29Q8N6K0 151 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 PIFOQ8TCI5 191 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 PLEKHA3Q9HB20 300 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 KIAA1456Q9P272 454 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 ITGB1BP2Q9UKP3 347 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 TNCP24821 2201 aa9.16□□□□□ -0.94
C9orf3-220ENST00000489318 A0A1W2PN81 502 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 C15orf62A8K5M9 175 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 PRSS46E5RG02 174 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 CD5LO43866 347 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 CD24P25063 80 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 CHRNA7P36544 502 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 ATP5IP56385 69 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-220ENST00000489318 UBA52P62987 128 aaKnown RBP9.15□□□□□ -0.94
C9orf3-220ENST00000489318 NHLH2Q02577 135 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 PJVKQ0ZLH3 352 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 HES1Q14469 280 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 LRRC75BQ2VPJ9 315 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 SPINK9Q5DT21 86 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 FAM120AOSQ5T036 256 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 HAPLN4Q86UW8 402 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 SLC24A4Q8NFF2 622 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 NANPQ8TBE9 248 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 BSCL2Q96G97 398 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-220ENST00000489318 CLCC1Q96S66 551 aa9.15□□□□□ -0.94
C9orf3-220ENST00000489318 SRSF8Q9BRL6 282 aaKnown RBP9.15□□□□□ -0.94
C9orf3-220ENST00000489318 HIPK2Q9H2X6 1198 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms