RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PHLDA2Q53GA4 152 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 Q8N1Y9 231 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 GPX8Q8TED1 209 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 CCDC140Q96MF4 163 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 ZC4H2Q9NQZ6 224 aa10.66□□□□□ -0.7
VTI1A-206ENST00000489142 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 SMIM31A0A1B0GVY4 71 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 FAM25AB3EWG3 89 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 FAM25CB3EWG5 89 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 FAM25GB3EWG6 89 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 OR2C1O95371 312 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 IGHV4-30-4P0DP06 118 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 CTRB1P17538 263 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 RORCP51449 518 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 TATDN3Q17R31 274 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 GPR107Q5VW38 600 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 CTRB2Q6GPI1 263 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 OR10W1Q8NGF6 305 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 FCAMRQ8WWV6 532 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 PLEKHA2Q9HB19 425 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 NSG2Q9Y328 171 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.7
VTI1A-206ENST00000489142 IGLC7A0M8Q6 106 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 MFSD2BA6NFX1 497 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 M0QYG6 137 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 GABARAPO95166 117 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 CRYGCP07315 174 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 DEFA4P12838 97 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 G6PCP35575 357 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 LPAR6P43657 344 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 TSPAN5P62079 268 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 OR6F1Q8NGZ6 308 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 AIFM2Q9BRQ8 373 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 STAB2Q8WWQ8 2551 aa10.64□□□□□ -0.71
VTI1A-206ENST00000489142 IGLV11-55A0A075B6I3 123 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 MARCH11A6NNE9 402 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 GPR31O00270 319 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 KRASP01116 189 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 F2RP25116 425 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 ARL3P36405 182 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 ERVK-16P61578 105 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 ZNF585BQ52M93 769 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 DGCR14Q96DF8 476 aaKnown RBP10.63□□□□□ -0.71
VTI1A-206ENST00000489142 RCHY1Q96PM5 261 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 HINT2Q9BX68 163 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 COMMD9Q9P000 198 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 PEMTQ9UBM1 199 aa10.63□□□□□ -0.71
VTI1A-206ENST00000489142 NBEAL2Q6ZNJ1 2754 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 HUWE1Q7Z6Z7 4374 aaKnown RBP10.62□□□□□ -0.71
VTI1A-206ENST00000489142 H0Y980 276 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 GGCTO75223 188 aaKnown RBP10.62□□□□□ -0.71
VTI1A-206ENST00000489142 DHFRP00374 187 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 RCVRNP35243 200 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 CD300EQ496F6 205 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-206ENST00000489142 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 MZT2AQ6P582 158 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 DYNLRB2Q8TF09 96 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 CMTM3Q96MX0 182 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 THAP7Q9BT49 309 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-206ENST00000489142 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
VTI1A-206ENST00000489142 SCPEP1Q9HB40 452 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 EXTL2Q9UBQ6 330 aa10.62□□□□□ -0.71
VTI1A-206ENST00000489142 IGHV3-21A0A0B4J1V1 117 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 IGHV3-35A0A0C4DH35 117 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 ZNF320A2RRD8 509 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 OR13C7P0DN81 318 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 FOLR2P14207 255 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 HIST1H1BP16401 226 aaKnown RBP10.61□□□□□ -0.71
VTI1A-206ENST00000489142 ZNF182P17025 639 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-206ENST00000489142 WT1-ASQ06250 92 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 TBC1D26Q86UD7 250 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 SGPP2Q8IWX5 399 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 Q8N402 240 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 MRPS26Q9BYN8 205 aaKnown RBP10.61□□□□□ -0.71
VTI1A-206ENST00000489142 KLK11Q9UBX7 282 aa10.61□□□□□ -0.71
VTI1A-206ENST00000489142 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 TRAPPC2P0DI81 140 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 TRAPPC2BP0DI82 140 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 PI3P19957 117 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 GPR183P32249 361 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
VTI1A-206ENST00000489142 SPCS2Q15005 226 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 GPR141Q7Z602 305 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 OR52I2Q8NH67 350 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 AP3S1Q92572 193 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 WFDC10AQ9H1F0 79 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 PLEKHA3Q9HB20 300 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms