RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 IGHV3OR15-7A0A075B7D8 119 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 A0A1B0GU03 582 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 A0A1B0GV50 99 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 A0A1B0GWJ7 208 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 A0A1W2PPI3 338 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 IGSF23A1L1A6 192 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TMEM218A2RU14 115 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TMEM89A2RUT3 159 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 C15orf62A8K5M9 175 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SMIM1B2RUZ4 78 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ATP6V1G2-DDX39BF2Z307 99 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RNASEK-C17orf49H0YIS7 233 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 K7EM74 188 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ABCD4O14678 606 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SIGLEC5O15389 551 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SYNGR2O43760 224 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 PITX3O75364 302 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 DFFBO76075 338 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 CST7O76096 145 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SNAPINO95295 136 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 CLDN1O95832 211 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TSHBP01222 138 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 IGLV1-44P01699 117 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 HBZP02008 142 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TFF1P04155 84 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 HOXD4P09016 255 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 SEC11BP0C7V7 166 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 FAM157CP0CG43 387 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 IAPPP10997 89 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 PRDX2P32119 198 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 CD80P33681 288 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 CD200P41217 278 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RAB5CP51148 216 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 DYNLT3P51808 116 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ARHGDIBP52566 201 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 GNB1P62873 340 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TNFAIP6P98066 277 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 BAXQ07812 192 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TMEM267Q0VDI3 215 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 ZNF816Q0VGE8 651 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 MSMO1Q15800 293 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 Q3ZCU0 254 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 OR2B11Q5JQS5 317 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SPANXN5Q5MJ07 72 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 FAM53AQ6NSI3 398 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 BTNL3Q6UXE8 466 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 WDR82Q6UXN9 313 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RBMS3Q6XE24 437 aaKnown RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 Q6ZR03 302 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TRPT1Q86TN4 253 aaKnown RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 LRP11Q86VZ4 500 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 C11orf53Q8IXP5 236 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RPRMLQ8N4K4 120 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 COMMD1Q8N668 190 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 DRAM1Q8N682 238 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 KLHDC1Q8N7A1 406 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TPRX1Q8N7U7 411 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 OR5C1Q8NGR4 320 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 OR10Z1Q8NGY1 313 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 OR1L1Q8NH94 360 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RFESDQ8TAC1 157 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 FAM213BQ8TBF2 198 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ITLN1Q8WWA0 313 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TAF15Q92804 592 aaKnown RBP eCLIP2.32□□□□□ -2.04
CALD1-221ENST00000489019 LSM10Q969L4 123 aaKnown RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 GNPNAT1Q96EK6 184 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 SMIM8Q96KF7 97 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 OR2V2Q96R30 315 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 RAB40CQ96S21 281 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 CLCC1Q96S66 551 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ATP5SQ99766 215 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 SSX3Q99909 188 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 GINS3Q9BRX5 216 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 ALKBH7Q9BT30 221 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 WFDC1Q9HC57 220 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 HES4Q9HCC6 221 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 PARP11Q9NR21 331 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 LYRM2Q9NU23 88 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 UQCC1Q9NVA1 299 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 GNG12Q9UBI6 72 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 PSG11Q9UQ72 335 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TP53TG5Q9Y2B4 290 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 FAM215AQ9Y5M1 114 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 TNRC6AQ8NDV7 1962 aaKnown RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 NCOA6Q14686 2063 aaPredicted RBP2.32□□□□□ -2.04
CALD1-221ENST00000489019 UNC80Q8N2C7 3258 aa2.32□□□□□ -2.04
CALD1-221ENST00000489019 DNAH14Q0VDD8 3507 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 TNRC18O15417 2968 aaPredicted RBP2.31□□□□□ -2.04
CALD1-221ENST00000489019 TRGV8A0A0C4DH27 118 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 A0A0G2JRQ6 117 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 MEX3AA1L020 520 aaKnown RBP2.31□□□□□ -2.04
CALD1-221ENST00000489019 NKX6-3A6NJ46 265 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 CEBPZOSA8MTT3 80 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 DEFB108AA8MXU0 73 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 UMAD1C9J7I0 102 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 C12orf77C9JDV5 145 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 H3BP45 60 aa2.31□□□□□ -2.04
CALD1-221ENST00000489019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms