RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 SSX9Q7RTT3 188 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 OR5H2Q8NGV7 314 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 FCAMRQ8WWV6 532 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 FYTTD1Q96QD9 318 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 ANAPC10Q9UM13 185 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 TEX22C9J3V5 150 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 H0Y980 276 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 SULT1C2O00338 296 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 ZNF735P0CB33 412 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 NQO2P16083 231 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 NAT1P18440 290 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 PYDC2Q56P42 97 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 AADACL3Q5VUY0 350 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 OR4A47Q6IF82 309 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 CCDC190Q86UF4 302 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 GPHA2Q96T91 129 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 SCPEP1Q9HB40 452 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 HRASLSQ9HDD0 168 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 SLC2A9Q9NRM0 540 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 SIGLEC8Q9NYZ4 499 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 COMMD9Q9P000 198 aa10.56□□□□□ -0.72
SPTLC1-207ENST00000488921 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 RBMXL2O75526 392 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 OR2J3O76001 311 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 PRH1P02810 166 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 FGF2P09038 288 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 HLA-GP17693 338 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 ETV6P41212 452 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 C15orf32Q32M92 178 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 DHRS11Q6UWP2 260 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 OR51H1Q8NH63 302 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 MOB3AQ96BX8 217 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 ZNF2Q9BSG1 426 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 PLEKHA2Q9HB19 425 aa10.55□□□□□ -0.72
SPTLC1-207ENST00000488921 BMPR1BO00238 502 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 CTDSPLO15194 276 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 CRYGCP07315 174 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 IL6RP08887 468 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 PSMB6P28072 239 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 RFX2P48378 723 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 ERVK-16P61578 105 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 THOC7Q6I9Y2 204 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 LCN12Q6JVE5 192 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 HAPLN4Q86UW8 402 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 SGPP2Q8IWX5 399 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 Q8N402 240 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 ABHD1Q96SE0 405 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 ASCL2Q99929 193 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
SPTLC1-207ENST00000488921 GABARAPH6UMI1 98 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 PMP2P02689 132 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 RLN1P04808 185 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 DEFA4P12838 97 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 CTRB1P17538 263 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 S100GP29377 79 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 GNRHRP30968 328 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 INPP1P49441 399 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 ZNF846Q147U1 533 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 CTRB2Q6GPI1 263 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 GDPD1Q8N9F7 314 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 GPX8Q8TED1 209 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 WDR12Q9GZL7 423 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 FXYD6Q9H0Q3 95 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 FBXL7Q9UJT9 491 aa10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-207ENST00000488921 E7EUB6 86 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 GPR31O00270 319 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 UPK2O00526 184 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 CYB5BO43169 146 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 GGCTO75223 188 aaKnown RBP10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 S1PR2O95136 353 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 CSN3P07498 182 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 AREGP15514 252 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 F2RP25116 425 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 RCVRNP35243 200 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 HRH1P35367 487 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 TSPAN5P62079 268 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 RNASE12Q5GAN4 147 aaKnown RBP10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 IL34Q6ZMJ4 242 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 EEF1AKMT3Q96AZ1 226 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 ZMAT4Q9H898 229 aa10.52□□□□□ -0.73
SPTLC1-207ENST00000488921 V9GYH0 126 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms