RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 WDR83OSQ9Y284 106 aa11.84□□□□□ -0.51
RER1-207ENST00000488353 SPENQ96T58 3664 aaKnown RBP11.84□□□□□ -0.51
RER1-207ENST00000488353 K7EN84 100 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 SIRPB1O00241 398 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 CXorf1O96002 111 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 SP1P08047 785 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 TNFSF4P23510 183 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 CD1BP29016 333 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 EDDM3BP56851 147 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 PSG7Q13046 419 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 COX19Q49B96 90 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 PNKDQ8N490 385 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 DEFB124Q8NES8 71 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 TMEM204Q9BSN7 226 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 WNT10AQ9GZT5 417 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 IGHV2-26A0A0B4J1V2 119 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 RAMP3O60896 148 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 S1PR2O95136 353 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 FRMD6-AS1P0C7T7 363 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 STAG3L2P0CL84 134 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 STAG3L3P0CL85 134 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 TGFBR3Q03167 851 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 TMPRSS7Q7RTY8 843 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 ST6GALNAC3Q8NDV1 305 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 BORCS7Q96B45 105 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 FER1L6-AS2Q96M78 137 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
RER1-207ENST00000488353 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
RER1-207ENST00000488353 C9JCJ5 164 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 ARR3P36575 388 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 BPIFB3P59826 476 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
RER1-207ENST00000488353 GNG3P63215 75 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 OR8I2Q8N0Y5 310 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 DEFB127Q9H1M4 99 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 TRAV30A0A087WSZ9 112 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 IGHV1-69-2A0A0G2JMI3 117 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 SS18L1O75177 396 aaPredicted RBP11.82□□□□□ -0.52
RER1-207ENST00000488353 MPDU1O75352 247 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 RCHY1Q96PM5 261 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 LAMA5O15230 3695 aa11.82□□□□□ -0.52
RER1-207ENST00000488353 STUMQ69YW2 141 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 NIT1Q86X76 327 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 GCNT2Q8N0V5 402 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 V9GYV3 84 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 KMT2EQ8IZD2 1858 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 RBMXL2O75526 392 aaKnown RBP11.81□□□□□ -0.52
RER1-207ENST00000488353 CX3CL1P78423 397 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 ZNF816Q0VGE8 651 aaPredicted RBP11.81□□□□□ -0.52
RER1-207ENST00000488353 RNFT1Q5M7Z0 435 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
RER1-207ENST00000488353 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
RER1-207ENST00000488353 TRGV10A0A0A0MS01 117 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 OPRK1P41145 380 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 ARG2P78540 354 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 ZNF718Q3SXZ3 478 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 KLF13Q9Y2Y9 288 aaPredicted RBP11.8□□□□□ -0.52
RER1-207ENST00000488353 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 RAB29O14966 203 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 CA2P00918 260 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 Q6P435 159 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 ZNF497Q6ZNH5 498 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 TMEM136Q6ZRR5 245 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 H2BFWTQ7Z2G1 175 aa11.8□□□□□ -0.52
RER1-207ENST00000488353 YTHDF2Q9Y5A9 579 aaKnown RBP11.8□□□□□ -0.52
RER1-207ENST00000488353 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 PRR14LQ5THK1 2151 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 NKX2-8O15522 239 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 CLDN14O95500 239 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 FTH1P19P0C7X4 201 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 CATR1Q13166 79 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 VAMP3Q15836 100 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
RER1-207ENST00000488353 MDP1Q86V88 176 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 FAM122AQ96E09 287 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 VPS25Q9BRG1 176 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 OR2H2O95918 312 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 CD46P15529 392 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 SRIP30626 198 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
RER1-207ENST00000488353 FAM53AQ6NSI3 398 aaPredicted RBP11.79□□□□□ -0.52
RER1-207ENST00000488353 PIP4P1Q86T03 277 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 WDR86Q86TI4 376 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 TSKUQ8WUA8 353 aa11.79□□□□□ -0.52
RER1-207ENST00000488353 C11orf52Q96A22 123 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms