RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 CD81P60033 236 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 KLK9Q2XQG4 91 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 ZNF818PQ6ZRF7 136 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 BORCS5Q969J3 196 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 TECRQ9NZ01 308 aaKnown RBP17.09■□□□□ 0.33
PTPN4-211ENST00000488279 KLK9Q9UKQ9 250 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 S4R3C0 116 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 ZNF785A8K8V0 405 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 TPPPO94811 219 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 IFNA6P05013 189 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 REG1AP05451 166 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 OR2B8PP59922 312 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 HERV-K104P61576 105 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 POU2AF1Q16633 256 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 FAM106AQ4KMX7 169 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 TMEM17Q86X19 198 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 CCDC140Q96MF4 163 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 NEURL2Q9BR09 285 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 COMMD5Q9GZQ3 224 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 EDA2RQ9HAV5 297 aa17.08■□□□□ 0.32
PTPN4-211ENST00000488279 CGB1A6NKQ9 187 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 UPK2O00526 184 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 GNRHRP30968 328 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 RPS19P39019 145 aaKnown RBP17.07■□□□□ 0.32
PTPN4-211ENST00000488279 UBE2NLQ5JXB2 153 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 AADACL3Q5VUY0 350 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 DHRS11Q6UWP2 260 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 DMBX1Q8NFW5 382 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 OR51H1Q8NH63 302 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 CXorf58Q96LI9 332 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 PLEKHA2Q9HB19 425 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 PLEKHA3Q9HB20 300 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 EHFQ9NZC4 300 aa17.07■□□□□ 0.32
PTPN4-211ENST00000488279 IGLV11-55A0A075B6I3 123 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 TRBV7-1A0A0A6YYK4 115 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 TRAV3A0A0B4J244 114 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 ZNF320A2RRD8 509 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 CBLN1P23435 193 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 TGFBR1P36897 503 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 RFX2P48378 723 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 GUCA2BQ16661 112 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 TMEM69Q5SWH9 247 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 SRSF8Q9BRL6 282 aaKnown RBP17.06■□□□□ 0.32
PTPN4-211ENST00000488279 VCX3AQ9NNX9 186 aa17.06■□□□□ 0.32
PTPN4-211ENST00000488279 CLEC3BP05452 202 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 ZFAND6Q6FIF0 208 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 SAMD12Q8N8I0 201 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 ZC4H2Q9NQZ6 224 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 TMEM140Q9NV12 185 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 THYN1Q9P016 225 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 CEPT1Q9Y6K0 416 aa17.05■□□□□ 0.32
PTPN4-211ENST00000488279 S1PR2O95136 353 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 FGF2P09038 288 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 CD7P09564 240 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 EDN2P20800 178 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 LSM3P62310 102 aaKnown RBP17.04■□□□□ 0.32
PTPN4-211ENST00000488279 LINC00322Q6ZN03 302 aaPredicted RBP17.04■□□□□ 0.32
PTPN4-211ENST00000488279 YIPF6Q96EC8 236 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 ZNF2Q9BSG1 426 aaPredicted RBP17.04■□□□□ 0.32
PTPN4-211ENST00000488279 QTRT1Q9BXR0 403 aaKnown RBP17.04■□□□□ 0.32
PTPN4-211ENST00000488279 COMMD9Q9P000 198 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 TENM2Q9NT68 2774 aa17.04■□□□□ 0.32
PTPN4-211ENST00000488279 A0A087WXM4 84 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 IGLC7A0M8Q6 106 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 OR11H12B2RN74 326 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 PMP2P02689 132 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 TAS2R46P59540 309 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 TAS2R20P59543 309 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 ERVK-16P61578 105 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 DEFB125Q8N687 156 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 TSPAN14Q8NG11 270 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 MOB3AQ96BX8 217 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 ANAPC10Q9UM13 185 aa17.03■□□□□ 0.32
PTPN4-211ENST00000488279 TMEM213A2RRL7 107 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 MFSD2BA6NFX1 497 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 CYB5BO43169 146 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 PGLYRP1O75594 196 aaPredicted RBP17.02■□□□□ 0.32
PTPN4-211ENST00000488279 RPA2P15927 270 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 F2RP25116 425 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 PRSS3P35030 304 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 ZNF57Q68EA5 555 aaPredicted RBP17.02■□□□□ 0.32
PTPN4-211ENST00000488279 CMTM1Q8IZ96 169 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 OR5H2Q8NGV7 314 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 CACNG8Q8WXS5 425 aa17.02■□□□□ 0.32
PTPN4-211ENST00000488279 WDR89Q96FK6 387 aaPredicted RBP17.02■□□□□ 0.32
PTPN4-211ENST00000488279 A8MWP6 167 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 RLN1P04808 185 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 TRAPPC2P0DI81 140 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 TRAPPC2BP0DI82 140 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 NAT1P18440 290 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 THOC7Q6I9Y2 204 aaKnown RBP17.01■□□□□ 0.31
PTPN4-211ENST00000488279 SLC16A13Q7RTY0 426 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 HSD17B13Q7Z5P4 300 aaPredicted RBP17.01■□□□□ 0.31
PTPN4-211ENST00000488279 UXS1Q8NBZ7 420 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 OR10W1Q8NGF6 305 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 OR6F1Q8NGZ6 308 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 HIPK2Q9H2X6 1198 aa17.01■□□□□ 0.31
PTPN4-211ENST00000488279 CSMD3Q7Z407 3707 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 TEX50A0A1B0GTY4 177 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 RBMY1BA6NDE4 496 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms