RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 C5orf30Q96GV9 206 aa6.19□□□□□ -1.42
NECTIN3-209ENST00000488016 ARPC5LQ9BPX5 153 aa6.19□□□□□ -1.42
NECTIN3-209ENST00000488016 JPT1Q9UK76 154 aa6.19□□□□□ -1.42
NECTIN3-209ENST00000488016 AMMECR1Q9Y4X0 333 aaPredicted RBP6.19□□□□□ -1.42
NECTIN3-209ENST00000488016 TRBV6-6A0A0A6YYG2 114 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 RNF222A6NCQ9 220 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 C5orf51A6NDU8 294 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 FAM90A9PA6NNJ1 464 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 M0QYG6 137 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 TSPAN9O75954 239 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 SFT2D2O95562 160 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 IFNA21P01568 189 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 CEACAM3P40198 252 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 CEACAM6P40199 344 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 DYNLT3P51808 116 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 PROK1P58294 105 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 ZNF816Q0VGE8 651 aaPredicted RBP6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 ABCA11PQ4W5N1 156 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 LY6G6FQ5SQ64 297 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 FAAP20Q6NZ36 180 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 TRAT1Q6PIZ9 186 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 MOB1BQ7L9L4 216 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 TGIF2LXQ8IUE1 241 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 KLHDC1Q8N7A1 406 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 OR5AP2Q8NGF4 316 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 OR4C13Q8NGP0 309 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 LHFPL5Q8TAF8 219 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 PPP1R1CQ8WVI7 109 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 ST8SIA2Q92186 375 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 GALMQ96C23 342 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 SAT2Q96F10 170 aaPredicted RBP6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 C2orf50Q96LR7 162 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 ZNF251Q9BRH9 671 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 ZC4H2Q9NQZ6 224 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 SERTAD4Q9NUC0 356 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 C14orf166Q9Y224 244 aaKnown RBP6.18□□□□□ -1.42
NECTIN3-209ENST00000488016 TEX13DA0A0J9YY54 714 aaPredicted RBP6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 LINC01548A6NM66 108 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 TRDCB7Z8K6 153 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 HSPA12AO43301 675 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 YPEL1O60688 119 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 PROP1O75360 226 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 SIX6O95475 246 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 GAPDHP04406 335 aaKnown RBP6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 LYL1P12980 280 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 TMEM11P17152 192 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 AKR1C4P17516 323 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 DTYMKP23919 212 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 BRS3P32247 399 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 HRH1P35367 487 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 RAB7AP51149 207 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 F2RL1P55085 397 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 HTD2P86397 168 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 ZNF833PQ6ZTB9 187 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 SGPP2Q8IWX5 399 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 STOML3Q8TAV4 291 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 CLUHP3Q96NS8 147 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 RBM14Q96PK6 669 aaKnown RBP6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 YPEL2Q96QA6 119 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 NABP2Q9BQ15 211 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 ST6GALNAC5Q9BVH7 336 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 NPFFR1Q9GZQ6 430 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 C16orf95Q9H693 158 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 PLEKHA2Q9HB19 425 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 MMP24Q9Y5R2 645 aa6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
NECTIN3-209ENST00000488016 TRAV14DV4A0A0A6YYC5 116 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 PMP2P02689 132 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 OR8U9P0C7N5 309 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CT45A6P0DMU7 189 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CT45A5P0DMU8 189 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CT45A7P0DMV0 189 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CD28P10747 220 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 IL3RAP26951 378 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 KIR2DS4P43632 304 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 VDAC2P45880 294 aaPredicted RBP6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 ZNF137PP52743 207 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 PPP1R1AQ13522 171 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 SMCO1Q147U7 214 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 SRSF7Q16629 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 C2orf68Q2NKX9 166 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 PRSS54Q6PEW0 395 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 DHRS11Q6UWP2 260 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 ALKAL2Q6UX46 152 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 KCTD9Q7L273 389 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 LHFPL1Q86WI0 220 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 BAP18Q8IXM2 172 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 Q8N6K4 173 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 C8orf31Q8N9H6 132 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 OR8U1Q8NH10 309 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 OR2T6Q8NHC8 308 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 NOL4LQ96MY1 436 aaPredicted RBP6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 GPHA2Q96T91 129 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 AGMATQ9BSE5 352 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 CABLES2Q9BTV7 478 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms