RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 PRELID3BQ9Y3B1 194 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 TNCP24821 2201 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 MEIS3P1A6NDR6 274 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 LYRM1O43325 122 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
SDC3-204ENST00000487984 SLC22A5O76082 557 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 PRH1P02810 166 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 IFNA6P05013 189 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 NAT1P18440 290 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 ARPC4P59998 168 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 RHOGP84095 191 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 IFITM3Q01628 133 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 EIF4EBP1Q13541 118 aaPredicted RBP9.38□□□□□ -0.91
SDC3-204ENST00000487984 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
SDC3-204ENST00000487984 TRIM16LQ309B1 348 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 RNASE10Q5GAN6 216 aaKnown RBP9.38□□□□□ -0.91
SDC3-204ENST00000487984 STEAP1BQ6NZ63 245 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 TMEM17Q86X19 198 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 VKORC1L1Q8N0U8 176 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 Q8N1Y9 231 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 BEST4Q8NFU0 473 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 ENKURQ8TC29 256 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 ANAPC10Q9UM13 185 aa9.38□□□□□ -0.91
SDC3-204ENST00000487984 TRBV9A0A0B4J1U6 114 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 DISC1C4P0D8 188 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 ACTL6BO94805 426 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 RAB3DO95716 219 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 CSN3P07498 182 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 IGHV4-30-4P0DP06 118 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 BRWD1-AS2P59051 145 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 EXOSC2Q13868 293 aaKnown RBP9.37□□□□□ -0.91
SDC3-204ENST00000487984 RPEL1Q2QD12 228 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 MMD2Q8IY49 270 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 TTC9CQ8N5M4 171 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 OR4S2Q8NH73 311 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 HSD17B10Q99714 261 aaKnown RBP9.37□□□□□ -0.91
SDC3-204ENST00000487984 SPIN2AQ99865 258 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 SPIN2BQ9BPZ2 258 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
SDC3-204ENST00000487984 FAM240BA0A1B0GVZ2 78 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 TEX22C9J3V5 150 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 BMPR1BO00238 502 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 PLA2G10O15496 165 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 KBTBD11O94819 623 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 OR2A4O95047 310 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 CD74P04233 296 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 CD3DP04234 171 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 OR5AP2Q8NGF4 316 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 SNAPC3Q92966 411 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 GPHA2Q96T91 129 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 PRRT1Q99946 306 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 HRASLSQ9HDD0 168 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 MCUBQ9NWR8 336 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 TBC1D24Q9ULP9 559 aa9.36□□□□□ -0.91
SDC3-204ENST00000487984 HMX3A6NHT5 357 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 A8MZ25 164 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 H0Y980 276 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 TSPAN5P62079 268 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 PLET1Q6UQ28 207 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 ZNF66Q6ZN08 573 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 C19orf35Q6ZS72 473 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 SGPP2Q8IWX5 399 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
SDC3-204ENST00000487984 ARRDC1Q8N5I2 433 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 NECAP1Q8NC96 275 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 VSTM2AQ8TAG5 236 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 OR2A7Q96R45 310 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 SIGLEC8Q9NYZ4 499 aa9.35□□□□□ -0.91
SDC3-204ENST00000487984 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.91
SDC3-204ENST00000487984 A0A1B0GW64 132 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 E7EUB6 86 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 TNFSF12O43508 249 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 OR2J3O76001 311 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 FCER2P06734 321 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 IL6RP08887 468 aaPredicted RBP9.34□□□□□ -0.91
SDC3-204ENST00000487984 FCGR2CP31995 323 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 HRH1P35367 487 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 RPL27AP46776 148 aaKnown RBP9.34□□□□□ -0.91
SDC3-204ENST00000487984 C15orf32Q32M92 178 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 OR4C16Q8NGL9 310 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 TMEM167AQ8TBQ9 72 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 SECTM1Q8WVN6 248 aa9.34□□□□□ -0.91
SDC3-204ENST00000487984 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms