RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RBFOX1Q9NWB1 397 aaKnown RBP3.12□□□□□ -1.91
BRCA1-217ENST00000487825 MLXQ9UH92 298 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 PRELID1Q9Y255 219 aa3.12□□□□□ -1.91
BRCA1-217ENST00000487825 TRAV25A0A0B4J276 109 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 ZSCAN12O43309 604 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 S1PR2O95136 353 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 H2BFMP0C1H6 154 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 STAG3L2P0CL84 134 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF44P15621 663 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CBLN1P23435 193 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 UCP1P25874 307 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 FMO3P31513 532 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 SSTR5P35346 364 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 SLC1A6P48664 564 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 MRPL19P49406 292 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 MTPNP58546 118 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 LYZP61626 148 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 GNG11P61952 73 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 DEFA5Q01523 94 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 ATXN7L3Q14CW9 347 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 USF2Q15853 346 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 LBHQ53QV2 105 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CLVS2Q5SYC1 327 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 SLC25A48Q6ZT89 311 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CROCCP3Q8IVE0 287 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 FAM58AQ8N1B3 248 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CENPSQ8N2Z9 138 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 PRSS35Q8N3Z0 413 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 OR1L6Q8NGR2 347 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CD300LFQ8TDQ1 290 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 GLYATL2Q8WU03 294 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 IFT81Q8WYA0 676 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 C4orf36Q96KX1 117 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF251Q9BRH9 671 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 KAT8Q9H7Z6 458 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 EXOSC4Q9NPD3 245 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 CLEC5AQ9NY25 188 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 RPL36Q9Y3U8 105 aaKnown RBP3.11□□□□□ -1.91
BRCA1-217ENST00000487825 DNAH8Q96JB1 4490 aa3.11□□□□□ -1.91
BRCA1-217ENST00000487825 IGKV1-27A0A075B6S5 117 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 A0A0U1RRA0 63 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 TMEM213A2RRL7 107 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SMIM23A6NLE4 172 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 TRPC5OSA6NMA1 111 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 A8MWP6 167 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 E5RGE8 158 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SH2D1BO14796 132 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 PRAF2O60831 178 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SPAG7O75391 227 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 CLN5O75503 358 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 DHRS3O75911 302 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 MT-ND2P03891 347 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SHBGP04278 402 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 GLAP06280 429 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 LYNP07948 512 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 RRASP10301 218 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 YAP1P46937 504 aaKnown RBP3.1□□□□□ -1.91
BRCA1-217ENST00000487825 PPT1P50897 306 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 GZMMP51124 257 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 C12orf74Q32Q52 190 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 ZNF691Q5VV52 312 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 FAM159AQ6UWV7 190 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 ASCL4Q6XD76 172 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 Q6ZVQ6 151 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SLC25A26Q70HW3 274 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 NRARPQ7Z6K4 114 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 VTCN1Q7Z7D3 282 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 FUNDC1Q8IVP5 155 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 SLC38A6Q8IZM9 456 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 MREGQ8N565 214 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 CHST4Q8NCG5 386 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 OR4C5Q8NGB2 326 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 OR51T1Q8NGJ9 327 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 RFESDQ8TAC1 157 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 KCNG3Q8TAE7 436 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 FAM46BQ96A09 425 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 USMG5Q96IX5 58 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 FAM210BQ96KR6 192 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 NICN1Q9BSH3 213 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 COMMD4Q9H0A8 199 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 MAGT1Q9H0U3 335 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 OR52D1Q9H346 318 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 ANKRD19PQ9H560 264 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 ADGRL4Q9HBW9 690 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 GPR84Q9NQS5 396 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 NSG2Q9Y328 171 aa3.1□□□□□ -1.91
BRCA1-217ENST00000487825 MEIKINA0A087WXM9 373 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 A0A087X0K7 114 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 FCN1O00602 326 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 UBDO15205 165 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 SLC31A2O15432 143 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 GYPBP06028 91 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 MIFP14174 115 aa3.09□□□□□ -1.91
BRCA1-217ENST00000487825 ZBTB25P24278 435 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms