RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 LHFPL3Q86UP9 236 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 LINC00528Q8N1L1 170 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 TMEM116Q8NCL8 245 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 RNF141Q8WVD5 230 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 TRUB1Q8WWH5 349 aaKnown RBP4.01□□□□□ -1.77
COL4A3-206ENST00000487633 FAM210BQ96KR6 192 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 Q96MT0 163 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 NIPSNAP3BQ9BS92 247 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 OR2D2Q9H210 308 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 Q9H3A6 140 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 C8orf4Q9NR00 106 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 PGPEP1Q9NXJ5 209 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 SMPD3Q9NY59 655 aaPredicted RBP4.01□□□□□ -1.77
COL4A3-206ENST00000487633 RDH8Q9NYR8 311 aa4.01□□□□□ -1.77
COL4A3-206ENST00000487633 WARS2Q9UGM6 360 aaKnown RBP4.01□□□□□ -1.77
COL4A3-206ENST00000487633 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 A0A087WTM6 91 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 TRAV3A0A0B4J244 114 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 LOC100130705A0A1B0GUX0 176 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 ZNF705FA8MVS1 300 aaPredicted RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 K7EMT4 169 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 NDUFA4O00483 81 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 PDCD6O75340 191 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 CA11O75493 328 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 RPSAP08865 295 aaKnown RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 ZNF688P0C7X2 276 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 ZNF705DP0CH99 300 aaPredicted RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 ZNF705BP0CI00 300 aaPredicted RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 HTR2CP28335 458 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 DUTP33316 252 aaKnown RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 OR2B8PP59922 312 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 RPL30P62888 115 aaKnown RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 IRF3Q14653 427 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 CDK10Q15131 360 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 FCN2Q15485 313 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 VMA21Q3ZAQ7 101 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 TMEM69Q5SWH9 247 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 UBE2UQ5VVX9 321 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 MEDAGQ5VYS4 303 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 TTC23Q5W5X9 447 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 CENPSQ8N2Z9 138 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 DHRSXQ8N5I4 330 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 PACRGLQ8N7B6 248 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 OR10W1Q8NGF6 305 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 OR2A7Q96R45 310 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 GPHA2Q96T91 129 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 SPIN2AQ99865 258 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 SPIN2BQ9BPZ2 258 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 VCX3BQ9H321 246 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 RAB9BQ9NP90 201 aa4□□□□□ -1.77
COL4A3-206ENST00000487633 YTHDF2Q9Y5A9 579 aaKnown RBP4□□□□□ -1.77
COL4A3-206ENST00000487633 A0A1W2PPQ1 181 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 IGLC7A0M8Q6 106 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 DAPL1A0PJW8 107 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 M0QYG6 137 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 CRTAPO75718 401 aaPredicted RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 OXTP01178 125 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 CTSGP08311 255 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 SPP1P10451 314 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 GCSHP23434 173 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 ZBTB25P24278 435 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 PTBP1P26599 531 aaKnown RBP eCLIP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 BDKRB2P30411 391 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 CAPGP40121 348 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 MAP2K4P45985 399 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 RPL27AP46776 148 aaKnown RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 SNRPGP62308 76 aaKnown RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 HLA-DRB3P79483 266 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 TMED1Q13445 227 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 IGSF11Q5DX21 431 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 OGFRL1Q5TC84 451 aaPredicted RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 OR2G6Q5TZ20 316 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 GDF5OSQ5U4N7 250 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 PUSL1Q8N0Z8 303 aaKnown RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 OR5AK2Q8NH90 309 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 RHOXF1Q8NHV9 184 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 MRPL48Q96GC5 212 aaKnown RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 MYCBPQ99417 103 aaPredicted RBP3.99□□□□□ -1.77
COL4A3-206ENST00000487633 TM2D1Q9BX74 207 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 SPACA1Q9HBV2 294 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 AMBNQ9NP70 447 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 TMEM138Q9NPI0 162 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 AK3Q9UIJ7 227 aa3.99□□□□□ -1.77
COL4A3-206ENST00000487633 DPPA5A6NC42 116 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 J3QRK9 145 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 K7EIM0 57 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 K7EQG2 157 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 CASQ2O14958 399 aaPredicted RBP3.98□□□□□ -1.77
COL4A3-206ENST00000487633 FCGR3BO75015 233 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 KBTBD11O94819 623 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 LALBAP00709 142 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 IGLV2-14P01704 120 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 PSMD7P51665 324 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 PLA2G7Q13093 441 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 USF2Q15853 346 aaPredicted RBP3.98□□□□□ -1.77
COL4A3-206ENST00000487633 ESRGQ1W209 222 aa3.98□□□□□ -1.77
COL4A3-206ENST00000487633 AWAT2Q6E213 333 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms