RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 FCGR2CP31995 323 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 MXD1Q05195 221 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 GUCA2BQ16661 112 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 CTRB2Q6GPI1 263 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 ZNF773Q6PK81 442 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 FCGR1BQ92637 280 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 SLC25A38Q96DW6 304 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 WDR89Q96FK6 387 aaPredicted RBP9.18□□□□□ -0.94
VPS16-208ENST00000487461 ZC4H2Q9NQZ6 224 aa9.18□□□□□ -0.94
VPS16-208ENST00000487461 TECRQ9NZ01 308 aaKnown RBP9.18□□□□□ -0.94
VPS16-208ENST00000487461 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 REG1AP05451 166 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 FCER2P06734 321 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 HLA-GP17693 338 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 CBLN1P23435 193 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 ARL3P36405 182 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 ARPC4P59998 168 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
VPS16-208ENST00000487461 MSMO1Q15800 293 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 IDNKQ5T6J7 187 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 OR4A47Q6IF82 309 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 SRD5A3Q9H8P0 318 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 BET1LQ9NYM9 111 aa9.17□□□□□ -0.94
VPS16-208ENST00000487461 DNAH1Q9P2D7 4330 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 ZNF320A2RRD8 509 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 SULT1C2O00338 296 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 CLEC3BP05452 202 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 HIST1H1BP16401 226 aaKnown RBP9.16□□□□□ -0.94
VPS16-208ENST00000487461 OR2B8PP59922 312 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 TIMM50Q3ZCQ8 353 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 FAM106AQ4KMX7 169 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 ZBTB34Q8NCN2 500 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 SLC5A7Q9GZV3 580 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 AUNIPQ9H7T9 357 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 HRASLSQ9HDD0 168 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 MLXQ9UH92 298 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 ETV7Q9Y603 341 aa9.16□□□□□ -0.94
VPS16-208ENST00000487461 IGLV11-55A0A075B6I3 123 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 MFSD2BA6NFX1 497 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 UPK2O00526 184 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS16-208ENST00000487461 DHFRP00374 187 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 PPYP01298 95 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 DEFA4P12838 97 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 SCAND1P57086 179 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
VPS16-208ENST00000487461 TMEM61Q8N0U2 210 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 GIMAP1Q8WWP7 306 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 AIFM2Q9BRQ8 373 aa9.15□□□□□ -0.94
VPS16-208ENST00000487461 A0A0A6YYH2 397 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 A6NJ64 397 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 HPRT1P00492 218 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 TAS2R31P59538 309 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 FXYD4P59646 89 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 POU2AF1Q16633 256 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 ZNF818PQ6ZRF7 136 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 DIABLOQ9NR28 239 aa9.14□□□□□ -0.95
VPS16-208ENST00000487461 MEIS3P1A6NDR6 274 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 A8MWP6 167 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 SCAF4O95104 1147 aaKnown RBP9.13□□□□□ -0.95
VPS16-208ENST00000487461 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 RPA2P15927 270 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 NQO2P16083 231 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 GNRHRP30968 328 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 SLC16A13Q7RTY0 426 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 OR5AP2Q8NGF4 316 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 OR10W1Q8NGF6 305 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 IL17DQ8TAD2 202 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 CXorf58Q96LI9 332 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 TMEM140Q9NV12 185 aa9.13□□□□□ -0.95
VPS16-208ENST00000487461 RSL24D1Q9UHA3 163 aaKnown RBP9.13□□□□□ -0.95
VPS16-208ENST00000487461 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 TEX50A0A1B0GTY4 177 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 S1PR2O95136 353 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS16-208ENST00000487461 GPR183P32249 361 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 CBX5P45973 191 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 CATR1Q13166 79 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 ZNF585BQ52M93 769 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 DHRS11Q6UWP2 260 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 TMEM17Q86X19 198 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 OR52B4Q8NGK2 314 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 OR51H1Q8NH63 302 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms