RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TMED3Q9Y3Q3 217 aa5.45□□□□□ -1.54
HDAC3-209ENST00000486618 KMT2CQ8NEZ4 4911 aaKnown RBP5.45□□□□□ -1.54
HDAC3-209ENST00000486618 MAP1LC3B2A6NCE7 125 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 SH2D1BO14796 132 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 NPFFO15130 113 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 SPRY2O43597 315 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 CA11O75493 328 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 OR7C1O76099 320 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 GADD45GO95257 159 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 CA1P00915 261 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 HLA-DPB1P04440 258 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 UBBP0CG47 229 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 TRAPPC2P0DI81 140 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 TRAPPC2BP0DI82 140 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 CD34P28906 385 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 HOXD3P31249 432 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 MTPNP58546 118 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 LTC4SQ16873 150 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 NSUN5P1Q3KNT7 163 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 DEFB121Q5J5C9 76 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 PAGE3Q5JUK9 113 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 OTPQ5XKR4 325 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 GLYATQ6IB77 296 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 C11orf87Q6NUJ2 197 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF730Q6ZMV8 503 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 VMO1Q7Z5L0 202 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 LINC01551Q86U37 167 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 OAFQ86UD1 273 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 CALHM3Q86XJ0 350 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 KLHDC1Q8N7A1 406 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 TPRX1Q8N7U7 411 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 OR10G4Q8NGN3 311 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 PFN4Q8NHR9 129 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 MCFD2Q8NI22 146 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 TMEM255BQ8WV15 326 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 SLC7A6Q92536 515 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF503Q96F45 646 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 REEP6Q96HR9 211 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 DNAJC30Q96LL9 226 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 RCHY1Q96PM5 261 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 C20orf144Q9BQM9 153 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 MAP1LC3BQ9GZQ8 125 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 IKZF5Q9H5V7 419 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 EFCAB1Q9HAE3 211 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 SIGLEC8Q9NYZ4 499 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 TECRQ9NZ01 308 aaKnown RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 RIMS3Q9UJD0 308 aa5.44□□□□□ -1.54
HDAC3-209ENST00000486618 RPUSD1Q9UJJ7 312 aaKnown RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 AK6Q9Y3D8 172 aaKnown RBP5.44□□□□□ -1.54
HDAC3-209ENST00000486618 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 TRBV5-3A0A0A0MS03 114 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 BORCS7-ASMTA0A0B4J1R7 106 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 A0A0G2JND7 137 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 DAPL1A0PJW8 107 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 F5H697 171 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 TAAR5O14804 337 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HMGB3O15347 200 aaKnown RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HBE1P02100 147 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 VSIG10L2P0DP72 767 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HMGA2P52926 109 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 GNGT1P63211 74 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HIST1H3AP68431 136 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 MEF2DQ14814 521 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 ZFP69Q49AA0 526 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 TMEM69Q5SWH9 247 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 AKR1C8PQ5T2L2 129 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 RSBN1Q5VWQ0 802 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 LAMTOR1Q6IAA8 161 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 LINC00299Q6ZSB3 139 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 SLC25A48Q6ZT89 311 aaKnown RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HIST2H3AQ71DI3 136 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 FAM19A1Q7Z5A9 133 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 NDUFA11Q86Y39 141 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 CHST4Q8NCG5 386 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 DUSP18Q8NEJ0 188 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 ASB13Q8WXK3 278 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 NIPSNAP3BQ9BS92 247 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 TMEM126AQ9H061 195 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 FNDC4Q9H6D8 234 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 RCC2Q9P258 522 aaKnown RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 KAAG1Q9UBP8 84 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF230Q9UIE0 474 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-209ENST00000486618 HSPB8Q9UJY1 196 aa5.43□□□□□ -1.54
HDAC3-209ENST00000486618 MEIKINA0A087WXM9 373 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 A0A1B0GW55 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 FAM231BA6NCW3 169 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 B5MCH6 92 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 H3BUX3 64 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 K7EIL1 84 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DEGS1O15121 323 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 FABP7O15540 132 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 CDS2O95674 445 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 GYPAP02724 150 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 CRYGDP07320 174 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L2P0CJ85 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L3P0CJ86 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L5P0CJ88 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L6P0CJ89 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L7P0CJ90 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 SAA4P35542 130 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms