RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C15orf40Q8WUR7 153 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 SLC2A9Q9NRM0 540 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 PGLYRP1O75594 196 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 REG1AP05451 166 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 IL6RP08887 468 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 GP9P14770 177 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 RPA2P15927 270 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 F2RP25116 425 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 PSMB6P28072 239 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 ALDH3B2P48448 385 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 POU2AF1Q16633 256 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 RNASE10Q5GAN6 216 aaKnown RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 C19orf35Q6ZS72 473 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 LYSMD2Q8IV50 215 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 SLC38A6Q8IZM9 456 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 RAB2BQ8WUD1 216 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 DGCR14Q96DF8 476 aaKnown RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 QTRT1Q9BXR0 403 aaKnown RBP9.88□□□□□ -0.83
CHMP3-208ENST00000486404 PEMTQ9UBM1 199 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 FBXL7Q9UJT9 491 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
CHMP3-208ENST00000486404 M0QYG6 137 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 UPK2O00526 184 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 CYB5BO43169 146 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 RBMXL2O75526 392 aaKnown RBP9.87□□□□□ -0.83
CHMP3-208ENST00000486404 SNAPC5O75971 98 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 MYOD1P15172 320 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 LPAR6P43657 344 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 OR2B8PP59922 312 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 KLF5Q13887 457 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-208ENST00000486404 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 THOC7Q6I9Y2 204 aaKnown RBP9.87□□□□□ -0.83
CHMP3-208ENST00000486404 C11orf87Q6NUJ2 197 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
CHMP3-208ENST00000486404 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
CHMP3-208ENST00000486404 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.86□□□□□ -0.83
CHMP3-208ENST00000486404 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 BMPR1BO00238 502 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 KRASP01116 189 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 FGF2P09038 288 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 PGAM2P15259 253 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 TBPP20226 339 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 SPCS2Q15005 226 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 TBC1D26Q86UD7 250 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 LAX1Q8IWV1 398 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 OR52I2Q8NH67 350 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 FCAMRQ8WWV6 532 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
CHMP3-208ENST00000486404 HINT2Q9BX68 163 aa9.86□□□□□ -0.83
CHMP3-208ENST00000486404 A0A1B0GW64 132 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 PPP5D1E7EU14 171 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 E7EUB6 86 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 H0Y980 276 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 TPPPO94811 219 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 IGLV1-51P01701 117 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 IGHV3-23P01764 117 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 CRYGCP07315 174 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 NHLRC4P0CG21 123 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-208ENST00000486404 CTRB1P17538 263 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 G6PCP35575 357 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 ARL3P36405 182 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 MECP2P51608 486 aaKnown RBP9.85□□□□□ -0.83
CHMP3-208ENST00000486404 PPP5CP53041 499 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 CTRB2Q6GPI1 263 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 LCN12Q6JVE5 192 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-208ENST00000486404 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 TSC22D3Q99576 134 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 BCL7BQ9BQE9 202 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 PLA2G2EQ9NZK7 142 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 THYN1Q9P016 225 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 CCDC59Q9P031 241 aaKnown RBP9.85□□□□□ -0.83
CHMP3-208ENST00000486404 PRNDQ9UKY0 176 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 S4R3C0 116 aa9.85□□□□□ -0.83
CHMP3-208ENST00000486404 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 GGCTO75223 188 aaKnown RBP9.84□□□□□ -0.83
CHMP3-208ENST00000486404 SERPINE2P07093 398 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 TRAPPC2P0DI81 140 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 TRAPPC2BP0DI82 140 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 TMBIM6P55061 237 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 TAS2R19P59542 299 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 MRPS10P82664 201 aaKnown RBP9.84□□□□□ -0.83
CHMP3-208ENST00000486404 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 GTSCR1Q86UQ5 136 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 SGPP2Q8IWX5 399 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 GDPD1Q8N9F7 314 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 LSM10Q969L4 123 aaKnown RBP9.84□□□□□ -0.83
CHMP3-208ENST00000486404 CXorf58Q96LI9 332 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 C6orf62Q9GZU0 229 aaPredicted RBP9.84□□□□□ -0.83
CHMP3-208ENST00000486404 KLK11Q9UBX7 282 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 MTFP1Q9UDX5 166 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 OR51B2Q9Y5P1 312 aa9.84□□□□□ -0.83
CHMP3-208ENST00000486404 IGLV11-55A0A075B6I3 123 aa9.83□□□□□ -0.84
CHMP3-208ENST00000486404 TRBV7-1A0A0A6YYK4 115 aa9.83□□□□□ -0.84
CHMP3-208ENST00000486404 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms