RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 CTRB2Q6GPI1 263 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 LHFPL1Q86WI0 220 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 OR4D10Q8NGI6 311 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 RAB2BQ8WUD1 216 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 BORCS5Q969J3 196 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 KLK9Q9UKQ9 250 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 ZNF256Q9Y2P7 627 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
CCHCR1-214ENST00000486060 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 FAM223BA6NKX1 122 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 H3BMQ9 156 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 BMPR1BO00238 502 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 CD3DP04234 171 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 ZP3P21754 424 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 PSMB6P28072 239 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 RPL5P46777 297 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 UCP3P55916 312 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-214ENST00000486060 MARCH11A6NNE9 402 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 RGS5O15539 181 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 TPPPO94811 219 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 NDUFB8O95169 186 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 IGKV1-39P01597 117 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 IGKV1D-39P04432 117 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 G6PCP35575 357 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 ATP5G2Q06055 141 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 C11orf87Q6NUJ2 197 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 TBC1D26Q86UD7 250 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 SLC25A42Q86VD7 318 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 NECAP1Q8NC96 275 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 OR10W1Q8NGF6 305 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 B9D2Q9BPU9 175 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 AIFM2Q9BRQ8 373 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 SLIRPQ9GZT3 109 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 NSG2Q9Y328 171 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 S4R3C0 116 aa12.7□□□□□ -0.38
CCHCR1-214ENST00000486060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 DBX1A6NMT0 343 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 KRASP01116 189 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 CD74P04233 296 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 PI3P19957 117 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 CMTM1Q8IZ96 169 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 MRGPRFQ96AM1 343 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 ISOC1Q96CN7 298 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 CCDC140Q96MF4 163 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 FBXL7Q9UJT9 491 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 CEPT1Q9Y6K0 416 aa12.69□□□□□ -0.38
CCHCR1-214ENST00000486060 IGLV11-55A0A075B6I3 123 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 PPP5D1E7EU14 171 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 GABARAPH6UMI1 98 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 IGLV1-51P01701 117 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 IGHV3-23P01764 117 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 FGF2P09038 288 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 RNASE10Q5GAN6 216 aaKnown RBP12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 TMEM229BQ8NBD8 167 aa12.68□□□□□ -0.38
CCHCR1-214ENST00000486060 DPPA5A6NC42 116 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 LY86O95711 162 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 CSN3P07498 182 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 EDN2P20800 178 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 RPEL1Q2QD12 228 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 FAAP20Q6NZ36 180 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 CADM3Q8N126 398 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 ARRDC1Q8N5I2 433 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 SEC22AQ96IW7 307 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 FAM212BQ9NTI7 297 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-214ENST00000486060 MFSD2BA6NFX1 497 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 GP9P14770 177 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 PTBP1P26599 531 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 MFAP2P55001 183 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 ERVK-16P61578 105 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 RND3P61587 244 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 SMIM4Q8WVI0 70 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 QTRT1Q9BXR0 403 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 NXF2Q9GZY0 626 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 NDUFA4L2Q9NRX3 87 aa12.66□□□□□ -0.38
CCHCR1-214ENST00000486060 CTDSPLO15194 276 aa12.65□□□□□ -0.38
CCHCR1-214ENST00000486060 RAB3DO95716 219 aa12.65□□□□□ -0.38
CCHCR1-214ENST00000486060 IFNA6P05013 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms