RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 DEFB121Q5J5C9 76 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 FAM216BQ8N7L0 139 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 SSC4DQ8WTU2 575 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 HSPB9Q9BQS6 159 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 SDF2L1Q9HCN8 221 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 RPL39P5Q59GN2 51 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 ANKRD31Q8N7Z5 1873 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 NPIPB13A6NJU9 1138 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 CRPP02741 224 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 IGLV3-21P80748 117 aaPredicted RBP8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 SPACA3Q8IXA5 215 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 RFLNBQ8N5W9 214 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 OR5AC2Q9NZP5 309 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 S4R3C0 116 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 KLF4O43474 513 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 P2RY4P51582 365 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 HIST1H2BAQ96A08 127 aa8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 SIRT4Q9Y6E7 314 aaPredicted RBP8.96□□□□□ -0.97
SRGAP3-207ENST00000485983 E9PLN8 166 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 THBDP07204 575 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 TEX45Q8NA69 505 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 VKORC1Q9BQB6 163 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 PGPEP1Q9NXJ5 209 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 DUSP14O95147 198 aaKnown RBP8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 IGHMP01871 453 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF708P17019 499 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 CNTFRP26992 372 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 ZXDCQ2QGD7 858 aaPredicted RBP8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 IFI27L2Q9H2X8 130 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 CASP8AP2Q9UKL3 1982 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 KBTBD11-OT1A0A1B0GTJ5 212 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 C19orf67A6NJJ6 358 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 C12orf54Q6X4T0 127 aa8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 CHCHD2Q9Y6H1 151 aaPredicted RBP8.96□□□□□ -0.98
SRGAP3-207ENST00000485983 HLA-DRB1P01911 266 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 NBEAP1P0C6P0 100 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 GZMMP51124 257 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 CMC4P56277 68 aaPredicted RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 WDR82Q6UXN9 313 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 FAM90A1Q86YD7 464 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 CTHRC1Q96CG8 243 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 GPHA2Q96T91 129 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 LINC00312Q9Y6C7 94 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 DOPEY2Q9Y3R5 2298 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 OR11H12B2RN74 326 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 SNRNP200O75643 2136 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 FOLR2P14207 255 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 UCP3P55916 312 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 FAM201AQ5SY85 155 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 OR11H2Q8NH07 326 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 MRPL18Q9H0U6 180 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 COL24A1Q17RW2 1714 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 PROB1E7EW31 1015 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 POC1AQ8NBT0 407 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RBMY1BA6NDE4 496 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RBMY1EA6NEQ0 496 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 PLA2G10O15496 165 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 CTSBP07858 339 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RBMY1DP0C7P1 496 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RBMY1A1P0DJD3 496 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RBMY1CP0DJD4 496 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 OR11H4Q8NGC9 324 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 LY75O60449 1722 aa8.95□□□□□ -0.98
SRGAP3-207ENST00000485983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 SLC25A28Q96A46 364 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 NUDT11Q96G61 164 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 TRBV5-7A0A0A0MS05 114 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 TRGV4A0A0C4DH28 118 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 SLC25A20O43772 301 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 HLA-DQB1P01920 261 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 IGHV1-2P23083 117 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 GCHFRP30047 84 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 C9orf106Q8NAJ2 232 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 KCNS1Q96KK3 526 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 NBR2O15453 112 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 LEPP41159 167 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 APCDD1LQ8NCL9 501 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 C12orf77C9JDV5 145 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 K7ERU9 68 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 RRHO14718 337 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 GREM1O60565 184 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 MDKP21741 143 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 FUT5Q11128 374 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 C11orf91Q3C1V1 193 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 C8orf82Q6P1X6 216 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 KIR3DL3Q8N743 410 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 WDYHV1Q96HA8 205 aa8.94□□□□□ -0.98
SRGAP3-207ENST00000485983 IL6RP08887 468 aaPredicted RBP8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 GPX4P36969 197 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms