RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 DEFA4P12838 97 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 AREGP15514 252 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 HIST1H1BP16401 226 aaKnown RBP12.94□□□□□ -0.34
SMC4-216ENST00000485645 CTRB1P17538 263 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 HLA-GP17693 338 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 ARL3P36405 182 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 OR4A5Q8NH83 315 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 DIABLOQ9NR28 239 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 BET1LQ9NYM9 111 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 EDN2P20800 178 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 KLK9Q2XQG4 91 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 SLC5A7Q9GZV3 580 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 HRASLSQ9HDD0 168 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 ZC4H2Q9NQZ6 224 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 KLK9Q9UKQ9 250 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 S4R3C0 116 aa12.93□□□□□ -0.34
SMC4-216ENST00000485645 OR11H12B2RN74 326 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 SULT1C2O00338 296 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.341e-7■■■□□ 15.2
SMC4-216ENST00000485645 REG1AP05451 166 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 MYOD1P15172 320 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 CBLN1P23435 193 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 FXYD4P59646 89 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 NCS1P62166 190 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 CATR1Q13166 79 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 SLC25A46Q96AG3 418 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 WDR89Q96FK6 387 aaPredicted RBP12.92□□□□□ -0.34
SMC4-216ENST00000485645 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
SMC4-216ENST00000485645 AUNIPQ9H7T9 357 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 RETNQ9HD89 108 aa12.92□□□□□ -0.34
SMC4-216ENST00000485645 TRBV7-1A0A0A6YYK4 115 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 ZNF320A2RRD8 509 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 CGB1A6NKQ9 187 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 HPRT1P00492 218 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 FCER2P06734 321 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 CBX5P45973 191 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 TAS2R31P59538 309 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 VBP1P61758 197 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 GIMAP1Q8WWP7 306 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 CXorf58Q96LI9 332 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 WFDC10AQ9H1F0 79 aa12.91□□□□□ -0.34
SMC4-216ENST00000485645 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 RBMY1BA6NDE4 496 aaKnown RBP12.9□□□□□ -0.34
SMC4-216ENST00000485645 RBMY1EA6NEQ0 496 aaKnown RBP12.9□□□□□ -0.34
SMC4-216ENST00000485645 CLEC3BP05452 202 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 RBMY1DP0C7P1 496 aaKnown RBP12.9□□□□□ -0.34
SMC4-216ENST00000485645 NQO2P16083 231 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 OR2B8PP59922 312 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 UBE2NLQ5JXB2 153 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 ZNF57Q68EA5 555 aaPredicted RBP12.9□□□□□ -0.34
SMC4-216ENST00000485645 SLC16A13Q7RTY0 426 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 OR5AP2Q8NGF4 316 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
SMC4-216ENST00000485645 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 A8MWP6 167 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 UPK2O00526 184 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 GABARAPO95166 117 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 POU2AF1Q16633 256 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 TMEM17Q86X19 198 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 UXS1Q8NBZ7 420 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 OR51H1Q8NH63 302 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 CD300LFQ8TDQ1 290 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 S100A16Q96FQ6 103 aaKnown RBP12.89□□□□□ -0.35
SMC4-216ENST00000485645 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
SMC4-216ENST00000485645 THYN1Q9P016 225 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 MLXQ9UH92 298 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 SELENOKQ9Y6D0 94 aa12.89□□□□□ -0.35
SMC4-216ENST00000485645 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 IGLC7A0M8Q6 106 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 XRCC3O43542 346 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 HERV-K104P61576 105 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 CTF1Q16619 201 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 GPR107Q5VW38 600 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 SAMD12Q8N8I0 201 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 DMBX1Q8NFW5 382 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 NAA50Q9GZZ1 169 aaKnown RBP12.88□□□□□ -0.35
SMC4-216ENST00000485645 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
SMC4-216ENST00000485645 TMEM140Q9NV12 185 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms