RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 IGHG4P01861 327 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 OR5AC1P0C628 307 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 TRAPPC2P0DI81 140 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 TRAPPC2BP0DI82 140 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 PF4V1P10720 104 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 DEFA4P12838 97 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 HIST1H1BP16401 226 aaKnown RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 CRIP2P52943 208 aaPredicted RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 BRWD1-AS2P59051 145 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ASAH1Q13510 395 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ECSCRQ19T08 205 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 SP6Q3SY56 376 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 C4orf46Q504U0 113 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF585BQ52M93 769 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 KHDC1LQ5JSQ8 128 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 Q6ZS46 218 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF329Q86UD4 541 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 MINDY2Q8NBR6 621 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 LFNGQ8NES3 379 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 OR1L6Q8NGR2 347 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 COQ8AQ8NI60 647 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 SRSF12Q8WXF0 261 aaKnown RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 NOL4LQ96MY1 436 aaPredicted RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 FYTTD1Q96QD9 318 aaKnown RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 TP53RKQ96S44 253 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 HSPB9Q9BQS6 159 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 QTRT1Q9BXR0 403 aaKnown RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.51□□□□□ -1.37
SF3A1-208ENST00000485618 THYN1Q9P016 225 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 OR51B2Q9Y5P1 312 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 NUBP2Q9Y5Y2 271 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 A0A1W2PN81 502 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 ARPC1BO15143 372 aaKnown RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 BRI3O95415 125 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 IFNA17P01571 189 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TCRBP04435 133 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 CHRNA7P36544 502 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 MECP2P51608 486 aaKnown RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 CCR6P51684 374 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 SUB1P53999 127 aaKnown RBP eCLIP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 CD83Q01151 205 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 PJVKQ0ZLH3 352 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM95Q3KNT9 176 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 FBLN7Q53RD9 439 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM268Q5VZI3 342 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 PLET1Q6UQ28 207 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 LSM10Q969L4 123 aaKnown RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 MRGPRFQ96AM1 343 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 USMG5Q96IX5 58 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 ALX4Q9H161 411 aaPredicted RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 GPN1Q9HCN4 374 aaPredicted RBP6.5□□□□□ -1.37
SF3A1-208ENST00000485618 COA4Q9NYJ1 87 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 LINC00527Q9UJ94 153 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 VSIG4Q9Y279 399 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
SF3A1-208ENST00000485618 TNCP24821 2201 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 A0A0B4J2A0 478 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 C13orf42A0A1B0GVH6 325 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 LINC01548A6NM66 108 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 PLA2G10O15496 165 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 SFT2D2O95562 160 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 LY86O95711 162 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 H2AFB2P0C5Z0 115 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 CD28P10747 220 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 RAB9AP51151 201 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 OR2B8PP59922 312 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 NSUN5P1Q3KNT7 163 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF429Q86V71 674 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 RNF152Q8N8N0 203 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 ADAD2Q8NCV1 583 aaKnown RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 FAM110DQ8TAY7 271 aaPredicted RBP6.49□□□□□ -1.37
SF3A1-208ENST00000485618 CASTOR1Q8WTX7 329 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 SEC22AQ96IW7 307 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 UBE2E2Q96LR5 201 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 PALMDQ9NP74 551 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM14BQ9NUH8 114 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 SHPKQ9UHJ6 478 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 TMED3Q9Y3Q3 217 aa6.49□□□□□ -1.37
SF3A1-208ENST00000485618 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
SF3A1-208ENST00000485618 RYR3Q15413 4870 aa6.48□□□□□ -1.37
SF3A1-208ENST00000485618 TEX50A0A1B0GTY4 177 aa6.48□□□□□ -1.37
SF3A1-208ENST00000485618 A0A1B0GU03 582 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms