RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	CCL28	Q9NRJ3	127 aa		10.03	□□□□□ -0.8
UBA3-210	ENST00000485424	THYN1	Q9P016	225 aa		10.03	□□□□□ -0.8
UBA3-210	ENST00000485424		S4R3C0	116 aa		10.03	□□□□□ -0.8
UBA3-210	ENST00000485424	OR11H12	B2RN74	326 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	TEX22	C9J3V5	150 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	LGALS9	O00182	355 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	HPRT1	P00492	218 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	HLA-A	P01891	365 aa	Known RBP	10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	REG1A	P05451	166 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	FCER2	P06734	321 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	IL6R	P08887	468 aa	Predicted RBP	10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	HLA-G	P17693	338 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	HERV-K104	P61576	105 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	MSMO1	Q15800	293 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	NEDD8	Q15843	81 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	DEFB114	Q30KQ6	69 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	TIMM50	Q3ZCQ8	353 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	OR4A47	Q6IF82	309 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	TMEM17	Q86X19	198 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	HOGA1	Q86XE5	327 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	GVQW1	Q8N7I0	195 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	OR5H6	Q8NGV6	325 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	GPHA2	Q96T91	129 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	THAP7	Q9BT49	309 aa	Predicted RBP	10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	COMMD5	Q9GZQ3	224 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	SRD5A3	Q9H8P0	318 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	BET1L	Q9NYM9	111 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	FRAS1	Q86XX4	4008 aa		10.02	□□□□□ -0.81
UBA3-210	ENST00000485424	TRBV7-1	A0A0A6YYK4	115 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	SULT1C2	O00338	296 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	NDUFB8	O95169	186 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	CRYGC	P07315	174 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	CD7	P09564	240 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	CLEC2L	P0C7M8	214 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	PTHLH	P12272	177 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	AREG	P15514	252 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	NQO2	P16083	231 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	MECP2	P51608	486 aa	Known RBP	10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	TAS2R31	P59538	309 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	ERVK-16	P61578	105 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	ANKRD55	Q3KP44	614 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	AADACL3	Q5VUY0	350 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	ZNF57	Q68EA5	555 aa	Predicted RBP	10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	GPHB5	Q86YW7	130 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	DEFB125	Q8N687	156 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	OR51H1	Q8NH63	302 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	RNF167	Q9H6Y7	350 aa		10.01	□□□□□ -0.81
UBA3-210	ENST00000485424	MEIS3P1	A6NDR6	274 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424		E7EUB6	86 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	TMEM127	O75204	238 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	CTRB1	P17538	263 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	CBLN1	P23435	193 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	CTRB2	Q6GPI1	263 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	C19orf35	Q6ZS72	473 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	CROCCP3	Q8IVE0	287 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	TSPAN14	Q8NG11	270 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	OR5AP2	Q8NGF4	316 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	OR52B4	Q8NGK2	314 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	CD300LF	Q8TDQ1	290 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	SLC25A38	Q96DW6	304 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	WDR89	Q96FK6	387 aa	Predicted RBP	10	□□□□□ -0.81
UBA3-210	ENST00000485424	S100A16	Q96FQ6	103 aa	Known RBP	10	□□□□□ -0.81
UBA3-210	ENST00000485424	CCDC140	Q96MF4	163 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	FAM110A	Q9BQ89	295 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	RETN	Q9HD89	108 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	EHF	Q9NZC4	300 aa		10	□□□□□ -0.81
UBA3-210	ENST00000485424	ZNF785	A8K8V0	405 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	RBFOX2	O43251	390 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	JTB	O76095	146 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	THOC7	Q6I9Y2	204 aa	Known RBP	9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	PLET1	Q6UQ28	207 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	CACNG8	Q8WXS5	425 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	FANCD2OS	Q96PS1	177 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	HIPK2	Q9H2X6	1198 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	AUNIP	Q9H7T9	357 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	ZC4H2	Q9NQZ6	224 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	SELENOK	Q9Y6D0	94 aa		9.99	□□□□□ -0.81
UBA3-210	ENST00000485424	UPK2	O00526	184 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	SCAF4	O95104	1147 aa	Known RBP	9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	CLEC3B	P05452	202 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	MYOD1	P15172	320 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	EDN2	P20800	178 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	GPR183	P32249	361 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	BRWD1-AS2	P59051	145 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	ZNF818P	Q6ZRF7	136 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	UXS1	Q8NBZ7	420 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	GIMAP1	Q8WWP7	306 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	MARC2	Q969Z3	335 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	SRSF8	Q9BRL6	282 aa	Known RBP	9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	QTRT1	Q9BXR0	403 aa	Known RBP	9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	WFDC10A	Q9H1F0	79 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	PLEKHA2	Q9HB19	425 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	VCX3A	Q9NNX9	186 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	TMEM140	Q9NV12	185 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	COMMD9	Q9P000	198 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	UFC1	Q9Y3C8	167 aa		9.98	□□□□□ -0.81
UBA3-210	ENST00000485424	IGLV11-55	A0A075B6I3	123 aa		9.97	□□□□□ -0.81
UBA3-210	ENST00000485424		A0A1B0GW64	132 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms