RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 HLA-GP17693 338 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 FCGR2CP31995 323 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 ARPC4P59998 168 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 OR4A47Q6IF82 309 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 SLC16A13Q7RTY0 426 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 BEST4Q8NFU0 473 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 OR5H6Q8NGV6 325 aa14.42□□□□□ -0.1
COL27A1-205ENST00000485397 IGLV11-55A0A075B6I3 123 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 TRAV18A0A075B6X5 111 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 TRAV3A0A0B4J244 114 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 SCAF4O95104 1147 aaKnown RBP14.41□□□□□ -0.1
COL27A1-205ENST00000485397 CLEC3BP05452 202 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 FCER2P06734 321 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 DEFA4P12838 97 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 HIST1H1BP16401 226 aaKnown RBP14.41□□□□□ -0.1
COL27A1-205ENST00000485397 SDC2P34741 201 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 TIMM50Q3ZCQ8 353 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 TM4SF20Q53R12 229 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 ZNF773Q6PK81 442 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 SPAG16Q8N0X2 631 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 OR52B4Q8NGK2 314 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 OR13F1Q8NGS4 319 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 HRASLSQ9HDD0 168 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 BET1LQ9NYM9 111 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 SSR3Q9UNL2 185 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 ALMS1Q8TCU4 4167 aa14.41□□□□□ -0.1
COL27A1-205ENST00000485397 A8MWP6 167 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 OR2B8PP59922 312 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 MXD1Q05195 221 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 BTNL8Q6UX41 500 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 UNQ9165/PRO28630Q6UXU0 137 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 HOGA1Q86XE5 327 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 OR4A5Q8NH83 315 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 RNF167Q9H6Y7 350 aa14.4□□□□□ -0.1
COL27A1-205ENST00000485397 SULT1C2O00338 296 aa14.39□□□□□ -0.11
COL27A1-205ENST00000485397 PPYP01298 95 aa14.39□□□□□ -0.11
COL27A1-205ENST00000485397 MSMO1Q15800 293 aa14.39□□□□□ -0.11
COL27A1-205ENST00000485397 SLC25A38Q96DW6 304 aa14.39□□□□□ -0.11
COL27A1-205ENST00000485397 SLC5A7Q9GZV3 580 aa14.39□□□□□ -0.11
COL27A1-205ENST00000485397 TRBV7-1A0A0A6YYK4 115 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 IGHV3-35A0A0C4DH35 117 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 IGLC7A0M8Q6 106 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 UPK2O00526 184 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 GPR183P32249 361 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 FXYD4P59646 89 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 ZBTB34Q8NCN2 500 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 ZNF502Q8TBZ5 544 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 FCGR1BQ92637 280 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 OVOL2Q9BRP0 275 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 GGTLC1Q9BX51 225 aa14.38□□□□□ -0.11
COL27A1-205ENST00000485397 RBFOX2O43251 390 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL27A1-205ENST00000485397 HPRT1P00492 218 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 C8orf88P0DMB2 117 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 TAS2R31P59538 309 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 ZNF585BQ52M93 769 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 IDNKQ5T6J7 187 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 AIFM2Q9BRQ8 373 aa14.37□□□□□ -0.11
COL27A1-205ENST00000485397 LOC102724200A0A096LPH7 203 aaPredicted RBP14.36□□□□□ -0.11
COL27A1-205ENST00000485397 RPA2P15927 270 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 NQO2P16083 231 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 CATR1Q13166 79 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 POU2AF1Q16633 256 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 PLET1Q6UQ28 207 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 ZNF818PQ6ZRF7 136 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 OR10W1Q8NGF6 305 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 OR51H1Q8NH63 302 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 AUNIPQ9H7T9 357 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 TMEM140Q9NV12 185 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 ETV7Q9Y603 341 aa14.36□□□□□ -0.11
COL27A1-205ENST00000485397 S1PR2O95136 353 aa14.35□□□□□ -0.11
COL27A1-205ENST00000485397 ANKRD55Q3KP44 614 aa14.35□□□□□ -0.11
COL27A1-205ENST00000485397 RBPMS2Q6ZRY4 209 aaKnown RBP14.35□□□□□ -0.11
COL27A1-205ENST00000485397 TMEM17Q86X19 198 aa14.35□□□□□ -0.11
COL27A1-205ENST00000485397 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
COL27A1-205ENST00000485397 COMMD5Q9GZQ3 224 aa14.35□□□□□ -0.11
COL27A1-205ENST00000485397 MRPL27Q9P0M9 148 aaKnown RBP14.35□□□□□ -0.11
COL27A1-205ENST00000485397 TRAV25A0A0B4J276 109 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 LOC100506127A0A0U1RQW1 187 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 MEIS3P1A6NDR6 274 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 PTBP1P26599 531 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL27A1-205ENST00000485397 SCAND1P57086 179 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 DMBX1Q8NFW5 382 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 OR1L6Q8NGR2 347 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 GIMAP1Q8WWP7 306 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
COL27A1-205ENST00000485397 A0A0A6YYH2 397 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 A6NJ64 397 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 ELLP55199 621 aaPredicted RBP14.33□□□□□ -0.12
COL27A1-205ENST00000485397 AADACL3Q5VUY0 350 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 OR5AP2Q8NGF4 316 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 SRSF8Q9BRL6 282 aaKnown RBP14.33□□□□□ -0.12
COL27A1-205ENST00000485397 QTRT1Q9BXR0 403 aaKnown RBP14.33□□□□□ -0.12
COL27A1-205ENST00000485397 ZNF436Q9C0F3 470 aaPredicted RBP14.33□□□□□ -0.12
COL27A1-205ENST00000485397 PLEKHA2Q9HB19 425 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 DIABLOQ9NR28 239 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 THYN1Q9P016 225 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 UBQLN2Q9UHD9 624 aa14.33□□□□□ -0.12
COL27A1-205ENST00000485397 TEX50A0A1B0GTY4 177 aa14.32□□□□□ -0.12
COL27A1-205ENST00000485397 TGOLN2O43493 480 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms