RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CA11O75493 328 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 SC5DO75845 299 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 HTR1AP08908 422 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 SPART-AS1P0CW21 52 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 HSD17B1P14061 328 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 C4BPBP20851 252 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 PSMB6P28072 239 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF93P35789 620 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 CAPGP40121 348 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 CEACAM6P40199 344 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 CCR9P51686 369 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 EMP1P54849 157 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 DEFB131AP59861 70 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 PTGES3Q15185 160 aaKnown RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 HMGN3Q15651 99 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 VMA21Q3ZAQ7 101 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 MORN3Q6PF18 240 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 SLC25A42Q86VD7 318 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 GID4Q8IVV7 300 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 STHQ8IWL8 128 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 TEX45Q8NA69 505 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 GIMAP1Q8WWP7 306 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 SRSF8Q9BRL6 282 aaKnown RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF436Q9C0F3 470 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF430Q9H8G1 570 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ISG20L2Q9H9L3 353 aaKnown RBP3.73□□□□□ -1.81
PTPN4-210ENST00000485247 TMEM14BQ9NUH8 114 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 TAS2R4Q9NYW5 299 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 MSRB1Q9NZV6 116 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF221Q9UK13 617 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 LRRC42Q9Y546 428 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ETV7Q9Y603 341 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 IFNA5P01569 189 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 AREGP15514 252 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 FUT3P21217 361 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 UBE2KP61086 200 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 CBX3Q13185 183 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 FAM98BQ52LJ0 330 aaKnown RBP3.72□□□□□ -1.81
PTPN4-210ENST00000485247 TMEM41BQ5BJD5 291 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 DDI2Q5TDH0 399 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 SIGIRRQ6IA17 410 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 CGB2Q6NT52 195 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 SETD6Q8TBK2 473 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 PDCD1LG2Q9BQ51 273 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 SELENOIQ9C0D9 397 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 BANF2Q9H503 90 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 MAGIXQ9H6Y5 334 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 SLC2A9Q9NRM0 540 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 FGFR1OP2Q9NVK5 253 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 OR1A1Q9P1Q5 309 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 AASSQ9UDR5 926 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 WARS2Q9UGM6 360 aaKnown RBP3.72□□□□□ -1.81
PTPN4-210ENST00000485247 GMPPBQ9Y5P6 360 aa3.72□□□□□ -1.81
PTPN4-210ENST00000485247 TRBV5-7A0A0A0MS05 114 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 DAPL1A0PJW8 107 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 OR2T8A6NH00 312 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 NPIPB5A8MRT5 1133 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 TEX22C9J3V5 150 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 J3QLW9 94 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 DYNC1I1O14576 645 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 GNGT2O14610 69 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 ITGB1BP1O14713 200 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 CHEK1O14757 476 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 CCDC22O60826 627 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 DHFRP00374 187 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 CST1P01037 141 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 REG1AP05451 166 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 GLAP06280 429 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 RPSAP08865 295 aaKnown RBP3.71□□□□□ -1.82
PTPN4-210ENST00000485247 PRB4P10163 310 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-210ENST00000485247 SPP1P10451 314 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 DEFA4P12838 97 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 ANXA8P13928 327 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF19P17023 458 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 ZBTB25P24278 435 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 PCP4P48539 62 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 SNRPGP62308 76 aaKnown RBP3.71□□□□□ -1.82
PTPN4-210ENST00000485247 PAFAH1B2P68402 229 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 EFNB1P98172 346 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 PLA2G7Q13093 441 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 GPR176Q14439 515 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 GLIPR1L1Q6UWM5 242 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 TRPT1Q86TN4 253 aaKnown RBP3.71□□□□□ -1.82
PTPN4-210ENST00000485247 FAM24BQ8N5W8 94 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF502Q8TBZ5 544 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 CXorf58Q96LI9 332 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 CMTM3Q96MX0 182 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 OR2A7Q96R45 310 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 RHPN1-AS1Q9BWJ2 59 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 PRRG3Q9BZD7 231 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 TMEM138Q9NPI0 162 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 SMPD3Q9NY59 655 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-210ENST00000485247 SMPXQ9UHP9 88 aa3.71□□□□□ -1.82
PTPN4-210ENST00000485247 IGLV11-55A0A075B6I3 123 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 IGHV3OR16-13A0A075B7E8 117 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms