RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 FOLR2P14207 255 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 AREGP15514 252 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 ARPC4P59998 168 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 DEFB114Q30KQ6 69 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 UBE2NLQ5JXB2 153 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 MFSD4AQ8N468 514 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 DEFB125Q8N687 156 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SAMD12Q8N8I0 201 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 AP3S1Q92572 193 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 E7EUB6 86 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TNFSF12O43508 249 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 NDUFB8O95169 186 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DHFRP00374 187 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HRASP01112 189 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MAS1LP35410 378 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ARL3P36405 182 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 EIF4EBP1Q13541 118 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MZT2AQ6P582 158 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF66Q6ZN08 573 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SECTM1Q8WVN6 248 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CACNG8Q8WXS5 425 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SLC25A38Q96DW6 304 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CCDC140Q96MF4 163 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SRD5A3Q9H8P0 318 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DMRT1Q9Y5R6 373 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
HLA-DQB1-208ENST00000484729 A0A1B0GW64 132 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CXorf65A6NEN9 183 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 LGALS9O00182 355 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 REG1AP05451 166 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 PTHLHP12272 177 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MYOD1P15172 320 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 PSMB6P28072 239 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 KIR2DS2P43631 304 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 WDR89Q96FK6 387 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HRASLSQ9HDD0 168 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZC4H2Q9NQZ6 224 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 COMMD3Q9UBI1 195 aa11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TRAV18A0A075B6X5 111 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FCER2P06734 321 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CRYGCP07315 174 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DEFA4P12838 97 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF182P17025 639 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HLA-GP17693 338 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FCGR2CP31995 323 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SPAG16Q8N0X2 631 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 GVQW1Q8N7I0 195 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DIABLOQ9NR28 239 aa11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CCDC59Q9P031 241 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DEDDO75618 318 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 PPYP01298 95 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HIST1H1BP16401 226 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CTRB1P17538 263 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CBLN1P23435 193 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FXYD4P59646 89 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CATR1Q13166 79 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CTRB2Q6GPI1 263 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR4A47Q6IF82 309 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 GPHB5Q86YW7 130 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TMEM61Q8N0U2 210 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DYNC2LI1Q8TCX1 351 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 S100A16Q96FQ6 103 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
HLA-DQB1-208ENST00000484729 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TMEM213A2RRL7 107 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MFSD2BA6NFX1 497 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 A6NJ64 397 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FAM25AB3EWG3 89 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FAM25CB3EWG5 89 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 FAM25GB3EWG6 89 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SULT1C2O00338 296 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HPGDSO60760 199 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 EIF4EP06730 217 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MSMO1Q15800 293 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF57Q68EA5 555 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 AIFM2Q9BRQ8 373 aa11.48□□□□□ -0.57
HLA-DQB1-208ENST00000484729 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms